Gene : Glyma.05G169000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21650:SF2 - KINETOCHORE PROTEIN NUF2 Genomic Order:  1690
Name:  ? Glyma.05G169000 Secondary Identifier:  ? PAC:30527351
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G169000 0.5kb upstream 0.5kb upstream 8369 true Chr05: 35947897-35956265 Glycine max
Glyma.05G169000 0.5kb upstream 0.5kb upstream 500 false Chr05: 35955766-35956265 Glycine max
Glyma.05G169000 0.5kb downstream 0.5kb downstream 8369 true Chr05: 35947397-35955765 Glycine max
Glyma.05G169000 0.5kb downstream 0.5kb downstream 500 false Chr05: 35947397-35947896 Glycine max
Glyma.05G169000 1.0kb upstream 1.0kb upstream 8869 true Chr05: 35947897-35956765 Glycine max
Glyma.05G169000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35955766-35956765 Glycine max
Glyma.05G169000 1.0kb downstream 1.0kb downstream 8869 true Chr05: 35946897-35955765 Glycine max
Glyma.05G169000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35946897-35947896 Glycine max
Glyma.05G169000 2.0kb upstream 2.0kb upstream 9869 true Chr05: 35947897-35957765 Glycine max
Glyma.05G169000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35955766-35957765 Glycine max
Glyma.05G169000 2.0kb downstream 2.0kb downstream 9869 true Chr05: 35945897-35955765 Glycine max
Glyma.05G169000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35945897-35947896 Glycine max
Glyma.05G169000 5.0kb upstream 5.0kb upstream 12869 true Chr05: 35947897-35960765 Glycine max
Glyma.05G169000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35955766-35960765 Glycine max
Glyma.05G169000 5.0kb downstream 5.0kb downstream 12869 true Chr05: 35942897-35955765 Glycine max
Glyma.05G169000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35942897-35947896 Glycine max
Glyma.05G169000 10.0kb upstream 10.0kb upstream 17869 true Chr05: 35947897-35965765 Glycine max
Glyma.05G169000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35955766-35965765 Glycine max
Glyma.05G169000 10.0kb downstream 10.0kb downstream 17869 true Chr05: 35937897-35955765 Glycine max
Glyma.05G169000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35937897-35947896 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302214 5265 Fabidae View MSA
124070020 5270 Rosid View MSA
123741477 5271 Pentapetalae View MSA
122794633 5272 Eudicot View MSA
122050952 5273 Angiosperm View MSA
121351685 5274 Embryophyte View MSA
123425820 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.476953 0.0 2.19766   Low
cufflinks 10.7676 0.0 48.4062    
cufflinks 2.14853 0.0 15.1073    
cufflinks 4.06938 0.0 23.942    
cufflinks 6.08616 0.0 29.368    
cufflinks 11.0496 0.0 48.0858   High
cufflinks 4.37787 0.0 21.1039    
cufflinks 4.1634 0.0 16.9643    
cufflinks 6.7529 0.0 32.2936    
cufflinks 0.734        
cufflinks 0.324       Low
cufflinks 0.68        
cufflinks 1.198        
cufflinks 1.409       High
cufflinks 0.161       Low
cufflinks 1.062        
cufflinks 0.21       Low
cufflinks 0.439        
cufflinks 2.11       High
cufflinks 0.797        
cufflinks 0.452        
cufflinks 0.932        
cufflinks 1.611       High
cufflinks 0.469        
cufflinks 0.954        
cufflinks 0.4        

0 Strain