Gene : Glyma.05G169600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23244:SF108 - F-BOX FAMILY PROTEIN Genomic Order:  1696
Name:  ? Glyma.05G169600 Secondary Identifier:  ? PAC:30526007
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G169600 0.5kb upstream 0.5kb upstream 3315 true Chr05: 35999766-36003080 Glycine max
Glyma.05G169600 0.5kb upstream 0.5kb upstream 500 false Chr05: 36002581-36003080 Glycine max
Glyma.05G169600 0.5kb downstream 0.5kb downstream 3315 true Chr05: 35999266-36002580 Glycine max
Glyma.05G169600 0.5kb downstream 0.5kb downstream 500 false Chr05: 35999266-35999765 Glycine max
Glyma.05G169600 1.0kb upstream 1.0kb upstream 3815 true Chr05: 35999766-36003580 Glycine max
Glyma.05G169600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36002581-36003580 Glycine max
Glyma.05G169600 1.0kb downstream 1.0kb downstream 3815 true Chr05: 35998766-36002580 Glycine max
Glyma.05G169600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35998766-35999765 Glycine max
Glyma.05G169600 2.0kb upstream 2.0kb upstream 4815 true Chr05: 35999766-36004580 Glycine max
Glyma.05G169600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36002581-36004580 Glycine max
Glyma.05G169600 2.0kb downstream 2.0kb downstream 4815 true Chr05: 35997766-36002580 Glycine max
Glyma.05G169600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35997766-35999765 Glycine max
Glyma.05G169600 5.0kb upstream 5.0kb upstream 7815 true Chr05: 35999766-36007580 Glycine max
Glyma.05G169600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36002581-36007580 Glycine max
Glyma.05G169600 5.0kb downstream 5.0kb downstream 7815 true Chr05: 35994766-36002580 Glycine max
Glyma.05G169600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35994766-35999765 Glycine max
Glyma.05G169600 10.0kb upstream 10.0kb upstream 12815 true Chr05: 35999766-36012580 Glycine max
Glyma.05G169600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36002581-36012580 Glycine max
Glyma.05G169600 10.0kb downstream 10.0kb downstream 12815 true Chr05: 35989766-36002580 Glycine max
Glyma.05G169600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35989766-35999765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303628 5265 Fabidae View MSA
124060809 5270 Rosid View MSA
123751909 5271 Pentapetalae View MSA
122785803 5272 Eudicot View MSA
122045845 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.412664 0.0 2.01958   Low
cufflinks 3.47436 0.0 13.8473    
cufflinks 0.830564 0.0 4.75182    
cufflinks 1.0179 0.0 7.21375    
cufflinks 4.11406 0.0 19.2342    
cufflinks 4.29902 0.0 15.8775    
cufflinks 2.04127 0.0 9.62918    
cufflinks 1.80175 0.0 8.90986    
cufflinks 3.88795 0.0 14.9114    
cufflinks 0.382        
cufflinks 0.412        
cufflinks 0.431        
cufflinks 1.375       High
cufflinks 1.989       High
cufflinks 0.197       Low
cufflinks 0.98        
cufflinks 0.317        
cufflinks 0.231       Low
cufflinks 1.135        
cufflinks 0.802        
cufflinks 0.34        
cufflinks 0.902        
cufflinks 1.614       High
cufflinks 0.446        
cufflinks 0.848        
cufflinks 0.279       Low

0 Strain