Gene : Glyma.05G170200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22959 - PYM PROTEIN Genomic Order:  1702
Name:  ? Glyma.05G170200 Secondary Identifier:  ? PAC:30524358
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G170200 0.5kb upstream 0.5kb upstream 4962 true Chr05: 36048486-36053447 Glycine max
Glyma.05G170200 0.5kb upstream 0.5kb upstream 500 false Chr05: 36048486-36048985 Glycine max
Glyma.05G170200 0.5kb downstream 0.5kb downstream 4962 true Chr05: 36048986-36053947 Glycine max
Glyma.05G170200 0.5kb downstream 0.5kb downstream 500 false Chr05: 36053448-36053947 Glycine max
Glyma.05G170200 1.0kb upstream 1.0kb upstream 5462 true Chr05: 36047986-36053447 Glycine max
Glyma.05G170200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36047986-36048985 Glycine max
Glyma.05G170200 1.0kb downstream 1.0kb downstream 5462 true Chr05: 36048986-36054447 Glycine max
Glyma.05G170200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36053448-36054447 Glycine max
Glyma.05G170200 2.0kb upstream 2.0kb upstream 6462 true Chr05: 36046986-36053447 Glycine max
Glyma.05G170200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36046986-36048985 Glycine max
Glyma.05G170200 2.0kb downstream 2.0kb downstream 6462 true Chr05: 36048986-36055447 Glycine max
Glyma.05G170200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36053448-36055447 Glycine max
Glyma.05G170200 5.0kb upstream 5.0kb upstream 9462 true Chr05: 36043986-36053447 Glycine max
Glyma.05G170200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36043986-36048985 Glycine max
Glyma.05G170200 5.0kb downstream 5.0kb downstream 9462 true Chr05: 36048986-36058447 Glycine max
Glyma.05G170200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36053448-36058447 Glycine max
Glyma.05G170200 10.0kb upstream 10.0kb upstream 14462 true Chr05: 36038986-36053447 Glycine max
Glyma.05G170200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36038986-36048985 Glycine max
Glyma.05G170200 10.0kb downstream 10.0kb downstream 14462 true Chr05: 36048986-36063447 Glycine max
Glyma.05G170200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36053448-36063447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041424 5273 Angiosperm View MSA
122303625 5265 Fabidae View MSA
124068267 5270 Rosid View MSA
123739244 5271 Pentapetalae View MSA
122789474 5272 Eudicot View MSA
121344890 5274 Embryophyte View MSA
123425112 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.66489 0.0 26.146    
cufflinks 3.84084 0.0 20.0863    
cufflinks 3.68449 0.0 21.1509    
cufflinks 3.58699 0.0 15.8399    
cufflinks 3.58731 0.0 15.7081    
cufflinks 7.16486 0.0 32.0706   High
cufflinks 3.68414 0.0 20.8165    
cufflinks 3.31001 0.0 21.4955    
cufflinks 5.74756 0.0 30.9435   High
cufflinks 0.189       Low
cufflinks 0.443       High
cufflinks 0.368        
cufflinks 0.436       High
cufflinks 0.423       High
cufflinks 0.268        
cufflinks 0.281        
cufflinks 0.229       Low
cufflinks 0.32        
cufflinks 0.346        
cufflinks 0.229       Low
cufflinks 0.394        
cufflinks 0.237       Low
cufflinks 0.291        
cufflinks 0.409       High
cufflinks 0.265        
cufflinks 0.344        

0 Strain