Gene : Glyma.05G170900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF120 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  1709
Name:  ? Glyma.05G170900 Secondary Identifier:  ? PAC:30525895
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G170900 0.5kb upstream 0.5kb upstream 2578 true Chr05: 36129790-36132367 Glycine max
Glyma.05G170900 0.5kb upstream 0.5kb upstream 500 false Chr05: 36131868-36132367 Glycine max
Glyma.05G170900 0.5kb downstream 0.5kb downstream 2578 true Chr05: 36129290-36131867 Glycine max
Glyma.05G170900 0.5kb downstream 0.5kb downstream 500 false Chr05: 36129290-36129789 Glycine max
Glyma.05G170900 1.0kb upstream 1.0kb upstream 3078 true Chr05: 36129790-36132867 Glycine max
Glyma.05G170900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36131868-36132867 Glycine max
Glyma.05G170900 1.0kb downstream 1.0kb downstream 3078 true Chr05: 36128790-36131867 Glycine max
Glyma.05G170900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36128790-36129789 Glycine max
Glyma.05G170900 2.0kb upstream 2.0kb upstream 4078 true Chr05: 36129790-36133867 Glycine max
Glyma.05G170900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36131868-36133867 Glycine max
Glyma.05G170900 2.0kb downstream 2.0kb downstream 4078 true Chr05: 36127790-36131867 Glycine max
Glyma.05G170900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36127790-36129789 Glycine max
Glyma.05G170900 5.0kb upstream 5.0kb upstream 7078 true Chr05: 36129790-36136867 Glycine max
Glyma.05G170900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36131868-36136867 Glycine max
Glyma.05G170900 5.0kb downstream 5.0kb downstream 7078 true Chr05: 36124790-36131867 Glycine max
Glyma.05G170900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36124790-36129789 Glycine max
Glyma.05G170900 10.0kb upstream 10.0kb upstream 12078 true Chr05: 36129790-36141867 Glycine max
Glyma.05G170900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36131868-36141867 Glycine max
Glyma.05G170900 10.0kb downstream 10.0kb downstream 12078 true Chr05: 36119790-36131867 Glycine max
Glyma.05G170900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36119790-36129789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313563 5265 Fabidae View MSA
124065641 5270 Rosid View MSA
123739206 5271 Pentapetalae View MSA
122793621 5272 Eudicot View MSA
122046791 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.359757 0.0 1.39231    
cufflinks 0.0546387 0.0 0.231328 Low Low
cufflinks 6.31618 0.0 19.5871    
cufflinks 3.02353 0.0 10.3212    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.479593 0.0 1.83483    
cufflinks 6.19243 0.0 19.194    
cufflinks 0.041     Low  
cufflinks 0.652        
cufflinks 0.007     Low Low
cufflinks 0.074     Low  
cufflinks 0.006     Low Low
cufflinks 0.236        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.754       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.611       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low Low
cufflinks 0.41        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.934       High

0 Strain