Gene : Glyma.05G186900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11573 - RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAIN Genomic Order:  1869
Name:  ? Glyma.05G186900 Secondary Identifier:  ? PAC:30524067
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12 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  
Gmax PWY-7220 Glycine max pathologic  
Gmax PWY-7222 Glycine max pathologic  
Gmax PWY-7226 Glycine max pathologic  
Gmax PWY-7227 Glycine max pathologic  
Gmax PWY-7228 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G186900 0.5kb upstream 0.5kb upstream 5764 true Chr05: 37334376-37340139 Glycine max
Glyma.05G186900 0.5kb upstream 0.5kb upstream 500 false Chr05: 37339640-37340139 Glycine max
Glyma.05G186900 0.5kb downstream 0.5kb downstream 5764 true Chr05: 37333876-37339639 Glycine max
Glyma.05G186900 0.5kb downstream 0.5kb downstream 500 false Chr05: 37333876-37334375 Glycine max
Glyma.05G186900 1.0kb upstream 1.0kb upstream 6264 true Chr05: 37334376-37340639 Glycine max
Glyma.05G186900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37339640-37340639 Glycine max
Glyma.05G186900 1.0kb downstream 1.0kb downstream 6264 true Chr05: 37333376-37339639 Glycine max
Glyma.05G186900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37333376-37334375 Glycine max
Glyma.05G186900 2.0kb upstream 2.0kb upstream 7264 true Chr05: 37334376-37341639 Glycine max
Glyma.05G186900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37339640-37341639 Glycine max
Glyma.05G186900 2.0kb downstream 2.0kb downstream 7264 true Chr05: 37332376-37339639 Glycine max
Glyma.05G186900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37332376-37334375 Glycine max
Glyma.05G186900 5.0kb upstream 5.0kb upstream 10264 true Chr05: 37334376-37344639 Glycine max
Glyma.05G186900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37339640-37344639 Glycine max
Glyma.05G186900 5.0kb downstream 5.0kb downstream 10264 true Chr05: 37329376-37339639 Glycine max
Glyma.05G186900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37329376-37334375 Glycine max
Glyma.05G186900 10.0kb upstream 10.0kb upstream 15264 true Chr05: 37334376-37349639 Glycine max
Glyma.05G186900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37339640-37349639 Glycine max
Glyma.05G186900 10.0kb downstream 10.0kb downstream 15264 true Chr05: 37324376-37339639 Glycine max
Glyma.05G186900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37324376-37334375 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307132 5265 Fabidae View MSA
124065461 5270 Rosid View MSA
123747957 5271 Pentapetalae View MSA
122795256 5272 Eudicot View MSA
122044157 5273 Angiosperm View MSA
121347545 5274 Embryophyte View MSA
123424335 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27975 0.0 6.71799   Low
cufflinks 15.73 0.0 42.5683   High
cufflinks 2.04034 0.0 6.07894   Low
cufflinks 4.96497 0.0 13.5107    
cufflinks 9.58462 0.0 25.5707    
cufflinks 5.97184 0.0 16.0959    
cufflinks 7.25034 0.0 19.4134    
cufflinks 6.55229 0.0 17.5905    
cufflinks 13.7125 0.0 36.8644   High
cufflinks 6.558        
cufflinks 1.062       Low
cufflinks 4.519        
cufflinks 11.979     High High
cufflinks 11.571     High High
cufflinks 1.637        
cufflinks 5.515        
cufflinks 1.873        
cufflinks 3.288        
cufflinks 13.414     High High
cufflinks 3.362        
cufflinks 1.23       Low
cufflinks 4.395        
cufflinks 11.952     High High
cufflinks 0.959       Low
cufflinks 4.029        
cufflinks 1.999        

0 Strain