Gene : Glyma.05G187200 G. max Wm82.a2.v1
Genomic Order:  1872 Name:  ? Glyma.05G187200
Secondary Identifier:  ? PAC:30525474
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G187200 0.5kb upstream 0.5kb upstream 833 true Chr05: 37351571-37352403 Glycine max
Glyma.05G187200 0.5kb upstream 0.5kb upstream 500 false Chr05: 37351904-37352403 Glycine max
Glyma.05G187200 0.5kb downstream 0.5kb downstream 833 true Chr05: 37351071-37351903 Glycine max
Glyma.05G187200 0.5kb downstream 0.5kb downstream 500 false Chr05: 37351071-37351570 Glycine max
Glyma.05G187200 1.0kb upstream 1.0kb upstream 1333 true Chr05: 37351571-37352903 Glycine max
Glyma.05G187200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37351904-37352903 Glycine max
Glyma.05G187200 1.0kb downstream 1.0kb downstream 1333 true Chr05: 37350571-37351903 Glycine max
Glyma.05G187200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37350571-37351570 Glycine max
Glyma.05G187200 2.0kb upstream 2.0kb upstream 2333 true Chr05: 37351571-37353903 Glycine max
Glyma.05G187200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37351904-37353903 Glycine max
Glyma.05G187200 2.0kb downstream 2.0kb downstream 2333 true Chr05: 37349571-37351903 Glycine max
Glyma.05G187200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37349571-37351570 Glycine max
Glyma.05G187200 5.0kb upstream 5.0kb upstream 5333 true Chr05: 37351571-37356903 Glycine max
Glyma.05G187200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37351904-37356903 Glycine max
Glyma.05G187200 5.0kb downstream 5.0kb downstream 5333 true Chr05: 37346571-37351903 Glycine max
Glyma.05G187200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37346571-37351570 Glycine max
Glyma.05G187200 10.0kb upstream 10.0kb upstream 10333 true Chr05: 37351571-37361903 Glycine max
Glyma.05G187200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37351904-37361903 Glycine max
Glyma.05G187200 10.0kb downstream 10.0kb downstream 10333 true Chr05: 37341571-37351903 Glycine max
Glyma.05G187200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37341571-37351570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673259 5273 Angiosperm View MSA
122310990 5265 Fabidae View MSA
124074266 5270 Rosid View MSA
123628534 5271 Pentapetalae View MSA
122662801 5272 Eudicot View MSA
120945149 5274 Embryophyte View MSA
122985544 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3748 0.0 39.7175   High
cufflinks 0.116772 0.0 0.529562 Low  
cufflinks 0.63647 0.0 2.55304    
cufflinks 0.123186 0.0 0.552763 Low  
cufflinks 1.3678 0.0 5.32678    
cufflinks 1.53835 0.0 5.98511    
cufflinks 0.294527 0.0 1.22982    
cufflinks 0.110672 0.0 0.500899 Low Low
cufflinks 0.457286 0.0 1.863    
cufflinks 9.925     High  
cufflinks 29.744     High High
cufflinks 7.47     High  
cufflinks 8.926     High  
cufflinks 1.021        
cufflinks 9.967     High  
cufflinks 1.76        
cufflinks 91.356     High High
cufflinks 1.578        
cufflinks 0.418       Low
cufflinks 0.607       Low
cufflinks 8.12     High  
cufflinks 1.459        
cufflinks 1.345        
cufflinks 27.521     High High
cufflinks 0.414       Low
cufflinks 24.749     High High

0 Strain