Gene : Glyma.05G187900 G. max Wm82.a2.v1
Defline:  (1 of 135) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1879
Name:  ? Glyma.05G187900 Secondary Identifier:  ? PAC:30524671
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G187900 0.5kb upstream 0.5kb upstream 5474 true Chr05: 37414124-37419597 Glycine max
Glyma.05G187900 0.5kb upstream 0.5kb upstream 500 false Chr05: 37414124-37414623 Glycine max
Glyma.05G187900 0.5kb downstream 0.5kb downstream 5474 true Chr05: 37414624-37420097 Glycine max
Glyma.05G187900 0.5kb downstream 0.5kb downstream 500 false Chr05: 37419598-37420097 Glycine max
Glyma.05G187900 1.0kb upstream 1.0kb upstream 5974 true Chr05: 37413624-37419597 Glycine max
Glyma.05G187900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37413624-37414623 Glycine max
Glyma.05G187900 1.0kb downstream 1.0kb downstream 5974 true Chr05: 37414624-37420597 Glycine max
Glyma.05G187900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37419598-37420597 Glycine max
Glyma.05G187900 2.0kb upstream 2.0kb upstream 6974 true Chr05: 37412624-37419597 Glycine max
Glyma.05G187900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37412624-37414623 Glycine max
Glyma.05G187900 2.0kb downstream 2.0kb downstream 6974 true Chr05: 37414624-37421597 Glycine max
Glyma.05G187900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37419598-37421597 Glycine max
Glyma.05G187900 5.0kb upstream 5.0kb upstream 9974 true Chr05: 37409624-37419597 Glycine max
Glyma.05G187900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37409624-37414623 Glycine max
Glyma.05G187900 5.0kb downstream 5.0kb downstream 9974 true Chr05: 37414624-37424597 Glycine max
Glyma.05G187900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37419598-37424597 Glycine max
Glyma.05G187900 10.0kb upstream 10.0kb upstream 14974 true Chr05: 37404624-37419597 Glycine max
Glyma.05G187900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37404624-37414623 Glycine max
Glyma.05G187900 10.0kb downstream 10.0kb downstream 14974 true Chr05: 37414624-37429597 Glycine max
Glyma.05G187900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37419598-37429597 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309166 5265 Fabidae View MSA
124073140 5270 Rosid View MSA
123752640 5271 Pentapetalae View MSA
122797253 5272 Eudicot View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411999 0.0 2.63355    
cufflinks 0.965196 0.0 5.55213    
cufflinks 0.221491 0.0 1.0963    
cufflinks 1.79459 0.0 8.93813    
cufflinks 6.64249 0.0 26.0296   High
cufflinks 0.113967 0.0 0.453501 Low Low
cufflinks 0.0546151 0.0 0.225237 Low Low
cufflinks 1.70002 0.0 8.42836    
cufflinks 30.5411 0.0 104.78 High High
cufflinks 0.171        
cufflinks 0.002     Low Low
cufflinks 0.018     Low  
cufflinks 0.055     Low  
cufflinks 0.002     Low Low
cufflinks 0.876       High
cufflinks 0.045     Low  
cufflinks 0.101        
cufflinks 0.12        
cufflinks 0.096     Low  
cufflinks 0.058     Low  
cufflinks 0.027     Low  
cufflinks 0.105        
cufflinks 0.107        
cufflinks 0.01     Low  
cufflinks 0.035     Low  
cufflinks 0.007     Low Low

0 Strain