Gene : Glyma.05G188300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12735:SF27 - BOLA-LIKE PROTEIN 2 Genomic Order:  1883
Name:  ? Glyma.05G188300 Secondary Identifier:  ? PAC:30527393
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G188300 0.5kb upstream 0.5kb upstream 3169 true Chr05: 37440094-37443262 Glycine max
Glyma.05G188300 0.5kb upstream 0.5kb upstream 500 false Chr05: 37442763-37443262 Glycine max
Glyma.05G188300 0.5kb downstream 0.5kb downstream 3169 true Chr05: 37439594-37442762 Glycine max
Glyma.05G188300 0.5kb downstream 0.5kb downstream 500 false Chr05: 37439594-37440093 Glycine max
Glyma.05G188300 1.0kb upstream 1.0kb upstream 3669 true Chr05: 37440094-37443762 Glycine max
Glyma.05G188300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37442763-37443762 Glycine max
Glyma.05G188300 1.0kb downstream 1.0kb downstream 3669 true Chr05: 37439094-37442762 Glycine max
Glyma.05G188300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37439094-37440093 Glycine max
Glyma.05G188300 2.0kb upstream 2.0kb upstream 4669 true Chr05: 37440094-37444762 Glycine max
Glyma.05G188300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37442763-37444762 Glycine max
Glyma.05G188300 2.0kb downstream 2.0kb downstream 4669 true Chr05: 37438094-37442762 Glycine max
Glyma.05G188300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37438094-37440093 Glycine max
Glyma.05G188300 5.0kb upstream 5.0kb upstream 7669 true Chr05: 37440094-37447762 Glycine max
Glyma.05G188300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37442763-37447762 Glycine max
Glyma.05G188300 5.0kb downstream 5.0kb downstream 7669 true Chr05: 37435094-37442762 Glycine max
Glyma.05G188300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37435094-37440093 Glycine max
Glyma.05G188300 10.0kb upstream 10.0kb upstream 12669 true Chr05: 37440094-37452762 Glycine max
Glyma.05G188300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37442763-37452762 Glycine max
Glyma.05G188300 10.0kb downstream 10.0kb downstream 12669 true Chr05: 37430094-37442762 Glycine max
Glyma.05G188300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37430094-37440093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026440 5273 Angiosperm View MSA
122302772 5265 Fabidae View MSA
124071602 5270 Rosid View MSA
123739226 5271 Pentapetalae View MSA
122792618 5272 Eudicot View MSA
121344740 5274 Embryophyte View MSA
123424571 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.7037 0.0 117.826 High  
cufflinks 22.7181 0.0 75.1297 High  
cufflinks 64.238 0.0 190.959 High High
cufflinks 18.8608 0.0 64.3001    
cufflinks 24.0536 0.0 78.3048 High  
cufflinks 22.3347 0.0 74.1605    
cufflinks 17.3944 0.0 60.9975   Low
cufflinks 29.9017 0.0 93.6017 High  
cufflinks 28.0968 0.0 89.1064 High  
cufflinks 4.775        
cufflinks 8.074     High High
cufflinks 9.924     High High
cufflinks 4.691        
cufflinks 4.564        
cufflinks 3.961        
cufflinks 4.951        
cufflinks 5.442        
cufflinks 8.948     High High
cufflinks 3.365       Low
cufflinks 4.669        
cufflinks 5.049        
cufflinks 5.143        
cufflinks 4.642        
cufflinks 5.5        
cufflinks 5.314        
cufflinks 3.841       Low

0 Strain