Gene : Glyma.05G190600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF125 - TRANSCRIPTION FACTOR HEC3-RELATED Genomic Order:  1906
Name:  ? Glyma.05G190600 Secondary Identifier:  ? PAC:30526899
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G190600 0.5kb upstream 0.5kb upstream 2338 true Chr05: 37634523-37636860 Glycine max
Glyma.05G190600 0.5kb upstream 0.5kb upstream 500 false Chr05: 37634523-37635022 Glycine max
Glyma.05G190600 0.5kb downstream 0.5kb downstream 2338 true Chr05: 37635023-37637360 Glycine max
Glyma.05G190600 0.5kb downstream 0.5kb downstream 500 false Chr05: 37636861-37637360 Glycine max
Glyma.05G190600 1.0kb upstream 1.0kb upstream 2838 true Chr05: 37634023-37636860 Glycine max
Glyma.05G190600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37634023-37635022 Glycine max
Glyma.05G190600 1.0kb downstream 1.0kb downstream 2838 true Chr05: 37635023-37637860 Glycine max
Glyma.05G190600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37636861-37637860 Glycine max
Glyma.05G190600 2.0kb upstream 2.0kb upstream 3838 true Chr05: 37633023-37636860 Glycine max
Glyma.05G190600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37633023-37635022 Glycine max
Glyma.05G190600 2.0kb downstream 2.0kb downstream 3838 true Chr05: 37635023-37638860 Glycine max
Glyma.05G190600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37636861-37638860 Glycine max
Glyma.05G190600 5.0kb upstream 5.0kb upstream 6838 true Chr05: 37630023-37636860 Glycine max
Glyma.05G190600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37630023-37635022 Glycine max
Glyma.05G190600 5.0kb downstream 5.0kb downstream 6838 true Chr05: 37635023-37641860 Glycine max
Glyma.05G190600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37636861-37641860 Glycine max
Glyma.05G190600 10.0kb upstream 10.0kb upstream 11838 true Chr05: 37625023-37636860 Glycine max
Glyma.05G190600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37625023-37635022 Glycine max
Glyma.05G190600 10.0kb downstream 10.0kb downstream 11838 true Chr05: 37635023-37646860 Glycine max
Glyma.05G190600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37636861-37646860 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312340 5265 Fabidae View MSA
124065698 5270 Rosid View MSA
123745456 5271 Pentapetalae View MSA
122795730 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.569592 0.0 2.10538    
cufflinks 1.11946 0.0 3.96609   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.68245 0.0 2.49916    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.663       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.231        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain