Gene : Glyma.05G192600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6 Genomic Order:  1926
Name:  ? Glyma.05G192600 Secondary Identifier:  ? PAC:30525928
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G192600 0.5kb upstream 0.5kb upstream 6392 true Chr05: 37781951-37788342 Glycine max
Glyma.05G192600 0.5kb upstream 0.5kb upstream 500 false Chr05: 37787843-37788342 Glycine max
Glyma.05G192600 0.5kb downstream 0.5kb downstream 6392 true Chr05: 37781451-37787842 Glycine max
Glyma.05G192600 0.5kb downstream 0.5kb downstream 500 false Chr05: 37781451-37781950 Glycine max
Glyma.05G192600 1.0kb upstream 1.0kb upstream 6892 true Chr05: 37781951-37788842 Glycine max
Glyma.05G192600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37787843-37788842 Glycine max
Glyma.05G192600 1.0kb downstream 1.0kb downstream 6892 true Chr05: 37780951-37787842 Glycine max
Glyma.05G192600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37780951-37781950 Glycine max
Glyma.05G192600 2.0kb upstream 2.0kb upstream 7892 true Chr05: 37781951-37789842 Glycine max
Glyma.05G192600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37787843-37789842 Glycine max
Glyma.05G192600 2.0kb downstream 2.0kb downstream 7892 true Chr05: 37779951-37787842 Glycine max
Glyma.05G192600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37779951-37781950 Glycine max
Glyma.05G192600 5.0kb upstream 5.0kb upstream 10892 true Chr05: 37781951-37792842 Glycine max
Glyma.05G192600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37787843-37792842 Glycine max
Glyma.05G192600 5.0kb downstream 5.0kb downstream 10892 true Chr05: 37776951-37787842 Glycine max
Glyma.05G192600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37776951-37781950 Glycine max
Glyma.05G192600 10.0kb upstream 10.0kb upstream 15892 true Chr05: 37781951-37797842 Glycine max
Glyma.05G192600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37787843-37797842 Glycine max
Glyma.05G192600 10.0kb downstream 10.0kb downstream 15892 true Chr05: 37771951-37787842 Glycine max
Glyma.05G192600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37771951-37781950 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304687 5265 Fabidae View MSA
124061432 5270 Rosid View MSA
123739619 5271 Pentapetalae View MSA
122787508 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8689 0.0 44.4809   High
cufflinks 4.14406 0.0 15.5618    
cufflinks 7.99798 0.0 29.4032   High
cufflinks 2.69074 0.0 8.88268    
cufflinks 0.822237 0.0 4.75628   Low
cufflinks 0.650597 0.0 2.93617   Low
cufflinks 5.42018 0.0 18.8726    
cufflinks 1.78276 0.0 8.71428    
cufflinks 1.1184 0.0 6.13644    
cufflinks 0.25        
cufflinks 0.043     Low Low
cufflinks 1.441       High
cufflinks 0.107        
cufflinks 0.074        
cufflinks 0.138        
cufflinks 1.759       High
cufflinks 0.068     Low  
cufflinks 0.685        
cufflinks 0.685        
cufflinks 1.782       High
cufflinks 0.053     Low Low
cufflinks 1.963       High
cufflinks 1.556       High
cufflinks 0.054     Low Low
cufflinks 2.077       High
cufflinks 0.056     Low Low

0 Strain