Gene : Glyma.05G193400 G. max Wm82.a2.v1
Genomic Order:  1934 Name:  ? Glyma.05G193400
Secondary Identifier:  ? PAC:30524049
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G193400 0.5kb upstream 0.5kb upstream 2634 true Chr05: 37837947-37840580 Glycine max
Glyma.05G193400 0.5kb upstream 0.5kb upstream 500 false Chr05: 37837947-37838446 Glycine max
Glyma.05G193400 0.5kb downstream 0.5kb downstream 2634 true Chr05: 37838447-37841080 Glycine max
Glyma.05G193400 0.5kb downstream 0.5kb downstream 500 false Chr05: 37840581-37841080 Glycine max
Glyma.05G193400 1.0kb upstream 1.0kb upstream 3134 true Chr05: 37837447-37840580 Glycine max
Glyma.05G193400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37837447-37838446 Glycine max
Glyma.05G193400 1.0kb downstream 1.0kb downstream 3134 true Chr05: 37838447-37841580 Glycine max
Glyma.05G193400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37840581-37841580 Glycine max
Glyma.05G193400 2.0kb upstream 2.0kb upstream 4134 true Chr05: 37836447-37840580 Glycine max
Glyma.05G193400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37836447-37838446 Glycine max
Glyma.05G193400 2.0kb downstream 2.0kb downstream 4134 true Chr05: 37838447-37842580 Glycine max
Glyma.05G193400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37840581-37842580 Glycine max
Glyma.05G193400 5.0kb upstream 5.0kb upstream 7134 true Chr05: 37833447-37840580 Glycine max
Glyma.05G193400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37833447-37838446 Glycine max
Glyma.05G193400 5.0kb downstream 5.0kb downstream 7134 true Chr05: 37838447-37845580 Glycine max
Glyma.05G193400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37840581-37845580 Glycine max
Glyma.05G193400 10.0kb upstream 10.0kb upstream 12134 true Chr05: 37828447-37840580 Glycine max
Glyma.05G193400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37828447-37838446 Glycine max
Glyma.05G193400 10.0kb downstream 10.0kb downstream 12134 true Chr05: 37838447-37850580 Glycine max
Glyma.05G193400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37840581-37850580 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122237772 5265 Fabidae Singleton cluster - no MSA
124071942 5270 Rosid View MSA
123745293 5271 Pentapetalae View MSA
122795627 5272 Eudicot View MSA
122050063 5273 Angiosperm View MSA
121311716 5274 Embryophyte View MSA
123348977 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.474016 0.0 1.83881    
cufflinks 1.08813 0.0 4.06323    
cufflinks 0.390341 0.0 1.52346    
cufflinks 0.392262 0.0 1.53128    
cufflinks 1.30734 0.0 4.84186    
cufflinks 0.249225 0.0 0.9898 Low Low
cufflinks 1.21811 0.0 4.53577    
cufflinks 0.847402 0.0 3.20029    
cufflinks 4.48177 0.0 15.0942   High
cufflinks 0.876        
cufflinks 1.593        
cufflinks 0.754        
cufflinks 0.532        
cufflinks 0.526        
cufflinks 15.624     High High
cufflinks 0.827        
cufflinks 0.164       Low
cufflinks 0.722        
cufflinks 1.504        
cufflinks 0.784        
cufflinks 2.499       High
cufflinks 0.74        
cufflinks 0.971        
cufflinks 0.428        
cufflinks 0.72        
cufflinks 0.463        

0 Strain