Gene : Glyma.05G184700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  1847
Name:  ? Glyma.05G184700 Secondary Identifier:  ? PAC:30523754
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G184700 0.5kb upstream 0.5kb upstream 4108 true Chr05: 37154566-37158673 Glycine max
Glyma.05G184700 0.5kb upstream 0.5kb upstream 500 false Chr05: 37154566-37155065 Glycine max
Glyma.05G184700 0.5kb downstream 0.5kb downstream 4108 true Chr05: 37155066-37159173 Glycine max
Glyma.05G184700 0.5kb downstream 0.5kb downstream 500 false Chr05: 37158674-37159173 Glycine max
Glyma.05G184700 1.0kb upstream 1.0kb upstream 4608 true Chr05: 37154066-37158673 Glycine max
Glyma.05G184700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37154066-37155065 Glycine max
Glyma.05G184700 1.0kb downstream 1.0kb downstream 4608 true Chr05: 37155066-37159673 Glycine max
Glyma.05G184700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37158674-37159673 Glycine max
Glyma.05G184700 2.0kb upstream 2.0kb upstream 5608 true Chr05: 37153066-37158673 Glycine max
Glyma.05G184700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37153066-37155065 Glycine max
Glyma.05G184700 2.0kb downstream 2.0kb downstream 5608 true Chr05: 37155066-37160673 Glycine max
Glyma.05G184700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37158674-37160673 Glycine max
Glyma.05G184700 5.0kb upstream 5.0kb upstream 8608 true Chr05: 37150066-37158673 Glycine max
Glyma.05G184700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37150066-37155065 Glycine max
Glyma.05G184700 5.0kb downstream 5.0kb downstream 8608 true Chr05: 37155066-37163673 Glycine max
Glyma.05G184700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37158674-37163673 Glycine max
Glyma.05G184700 10.0kb upstream 10.0kb upstream 13608 true Chr05: 37145066-37158673 Glycine max
Glyma.05G184700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37145066-37155065 Glycine max
Glyma.05G184700 10.0kb downstream 10.0kb downstream 13608 true Chr05: 37155066-37168673 Glycine max
Glyma.05G184700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37158674-37168673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306039 5265 Fabidae View MSA
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9535 0.0 55.1679    
cufflinks 14.6563 0.0 41.6548    
cufflinks 10.6755 0.0 31.5148    
cufflinks 17.421 0.0 48.6847    
cufflinks 11.8342 0.0 34.7041    
cufflinks 20.3111 0.0 55.992    
cufflinks 41.8256 0.0 111.676 High High
cufflinks 13.9411 0.0 39.9395    
cufflinks 10.7731 0.0 31.8617    
cufflinks 2.246        
cufflinks 0.818       Low
cufflinks 2.259        
cufflinks 1.529        
cufflinks 1.771        
cufflinks 0.916       Low
cufflinks 2.962       High
cufflinks 1.208        
cufflinks 3.036       High
cufflinks 2.728        
cufflinks 2.353        
cufflinks 0.913       Low
cufflinks 2.523        
cufflinks 3.092       High
cufflinks 1.302        
cufflinks 3.006       High
cufflinks 1.092       Low

0 Strain