Gene : Glyma.05G180700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10551//PTHR10551:SF13 - FASCIN Genomic Order:  1807
Name:  ? Glyma.05G180700 Secondary Identifier:  ? PAC:30523885
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G180700 0.5kb upstream 0.5kb upstream 3229 true Chr05: 36885298-36888526 Glycine max
Glyma.05G180700 0.5kb upstream 0.5kb upstream 500 false Chr05: 36888027-36888526 Glycine max
Glyma.05G180700 0.5kb downstream 0.5kb downstream 3229 true Chr05: 36884798-36888026 Glycine max
Glyma.05G180700 0.5kb downstream 0.5kb downstream 500 false Chr05: 36884798-36885297 Glycine max
Glyma.05G180700 1.0kb upstream 1.0kb upstream 3729 true Chr05: 36885298-36889026 Glycine max
Glyma.05G180700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36888027-36889026 Glycine max
Glyma.05G180700 1.0kb downstream 1.0kb downstream 3729 true Chr05: 36884298-36888026 Glycine max
Glyma.05G180700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36884298-36885297 Glycine max
Glyma.05G180700 2.0kb upstream 2.0kb upstream 4729 true Chr05: 36885298-36890026 Glycine max
Glyma.05G180700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36888027-36890026 Glycine max
Glyma.05G180700 2.0kb downstream 2.0kb downstream 4729 true Chr05: 36883298-36888026 Glycine max
Glyma.05G180700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36883298-36885297 Glycine max
Glyma.05G180700 5.0kb upstream 5.0kb upstream 7729 true Chr05: 36885298-36893026 Glycine max
Glyma.05G180700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36888027-36893026 Glycine max
Glyma.05G180700 5.0kb downstream 5.0kb downstream 7729 true Chr05: 36880298-36888026 Glycine max
Glyma.05G180700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36880298-36885297 Glycine max
Glyma.05G180700 10.0kb upstream 10.0kb upstream 12729 true Chr05: 36885298-36898026 Glycine max
Glyma.05G180700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36888027-36898026 Glycine max
Glyma.05G180700 10.0kb downstream 10.0kb downstream 12729 true Chr05: 36875298-36888026 Glycine max
Glyma.05G180700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36875298-36885297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313433 5265 Fabidae View MSA
124070042 5270 Rosid View MSA
123746465 5271 Pentapetalae View MSA
122796777 5272 Eudicot View MSA
122048839 5273 Angiosperm View MSA
121348630 5274 Embryophyte View MSA
123380948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.17725 0.0 4.10689   Low
cufflinks 33.1141 0.0 90.1419 High High
cufflinks 2.6151 0.0 8.23631    
cufflinks 20.4695 0.0 54.6677 High  
cufflinks 1.07348 0.0 3.77768   Low
cufflinks 4.04227 0.0 12.0267    
cufflinks 39.1871 0.0 107.891 High High
cufflinks 20.0183 0.0 53.4499    
cufflinks 1.75183 0.0 5.85337    
cufflinks 6.856        
cufflinks 0.635        
cufflinks 2.502        
cufflinks 0.191       Low
cufflinks 0.067     Low Low
cufflinks 0.21       Low
cufflinks 12.212     High High
cufflinks 1.986        
cufflinks 4.93        
cufflinks 25.142     High High
cufflinks 1.84        
cufflinks 0.667        
cufflinks 4.368        
cufflinks 6.626        
cufflinks 0.624        
cufflinks 7.478     High  
cufflinks 0.389        

0 Strain