Gene : Glyma.05G180900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30231 - DNA POLYMERASE III SUBUNIT EPSILON Genomic Order:  1809
Name:  ? Glyma.05G180900 Secondary Identifier:  ? PAC:30526659
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G180900 0.5kb upstream 0.5kb upstream 2196 true Chr05: 36900395-36902590 Glycine max
Glyma.05G180900 0.5kb upstream 0.5kb upstream 500 false Chr05: 36902091-36902590 Glycine max
Glyma.05G180900 0.5kb downstream 0.5kb downstream 2196 true Chr05: 36899895-36902090 Glycine max
Glyma.05G180900 0.5kb downstream 0.5kb downstream 500 false Chr05: 36899895-36900394 Glycine max
Glyma.05G180900 1.0kb upstream 1.0kb upstream 2696 true Chr05: 36900395-36903090 Glycine max
Glyma.05G180900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36902091-36903090 Glycine max
Glyma.05G180900 1.0kb downstream 1.0kb downstream 2696 true Chr05: 36899395-36902090 Glycine max
Glyma.05G180900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36899395-36900394 Glycine max
Glyma.05G180900 2.0kb upstream 2.0kb upstream 3696 true Chr05: 36900395-36904090 Glycine max
Glyma.05G180900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36902091-36904090 Glycine max
Glyma.05G180900 2.0kb downstream 2.0kb downstream 3696 true Chr05: 36898395-36902090 Glycine max
Glyma.05G180900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36898395-36900394 Glycine max
Glyma.05G180900 5.0kb upstream 5.0kb upstream 6696 true Chr05: 36900395-36907090 Glycine max
Glyma.05G180900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36902091-36907090 Glycine max
Glyma.05G180900 5.0kb downstream 5.0kb downstream 6696 true Chr05: 36895395-36902090 Glycine max
Glyma.05G180900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36895395-36900394 Glycine max
Glyma.05G180900 10.0kb upstream 10.0kb upstream 11696 true Chr05: 36900395-36912090 Glycine max
Glyma.05G180900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36902091-36912090 Glycine max
Glyma.05G180900 10.0kb downstream 10.0kb downstream 11696 true Chr05: 36890395-36902090 Glycine max
Glyma.05G180900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36890395-36900394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029593 5273 Angiosperm View MSA
122306914 5265 Fabidae View MSA
124064323 5270 Rosid View MSA
123746006 5271 Pentapetalae View MSA
122790595 5272 Eudicot View MSA
121298906 5274 Embryophyte View MSA
123336848 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016437 0.0 0.0855397 Low Low
cufflinks 0.0162618 0.0 0.0790857 Low Low
cufflinks 0.148122 0.0 0.585574 Low  
cufflinks 0.044876 0.0 0.193178 Low  
cufflinks 0.179727 0.0 0.704863 Low  
cufflinks 0.124131 0.0 0.495238 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.195286 0.0 0.762258 Low  
cufflinks 0.281202 0.0 1.35831   High
cufflinks 0.293       High
cufflinks 0.169        
cufflinks 0.038     Low  
cufflinks 0.631       High
cufflinks 0.075        
cufflinks 0.006     Low Low
cufflinks 0.055     Low  
cufflinks 0.097        
cufflinks 0.076     Low  
cufflinks 0.024     Low Low
cufflinks 0.042     Low  
cufflinks 0.235       High
cufflinks 0.068     Low  
cufflinks 0.025     Low  
cufflinks 0.074        
cufflinks 0.056     Low  
cufflinks 0.253       High

0 Strain