Gene : Glyma.05G181600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23315:SF66 - CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 Genomic Order:  1816
Name:  ? Glyma.05G181600 Secondary Identifier:  ? PAC:30524058
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G181600 0.5kb upstream 0.5kb upstream 11665 true Chr05: 36951163-36962827 Glycine max
Glyma.05G181600 0.5kb upstream 0.5kb upstream 500 false Chr05: 36962328-36962827 Glycine max
Glyma.05G181600 0.5kb downstream 0.5kb downstream 11665 true Chr05: 36950663-36962327 Glycine max
Glyma.05G181600 0.5kb downstream 0.5kb downstream 500 false Chr05: 36950663-36951162 Glycine max
Glyma.05G181600 1.0kb upstream 1.0kb upstream 12165 true Chr05: 36951163-36963327 Glycine max
Glyma.05G181600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36962328-36963327 Glycine max
Glyma.05G181600 1.0kb downstream 1.0kb downstream 12165 true Chr05: 36950163-36962327 Glycine max
Glyma.05G181600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36950163-36951162 Glycine max
Glyma.05G181600 2.0kb upstream 2.0kb upstream 13165 true Chr05: 36951163-36964327 Glycine max
Glyma.05G181600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36962328-36964327 Glycine max
Glyma.05G181600 2.0kb downstream 2.0kb downstream 13165 true Chr05: 36949163-36962327 Glycine max
Glyma.05G181600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36949163-36951162 Glycine max
Glyma.05G181600 5.0kb upstream 5.0kb upstream 16165 true Chr05: 36951163-36967327 Glycine max
Glyma.05G181600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36962328-36967327 Glycine max
Glyma.05G181600 5.0kb downstream 5.0kb downstream 16165 true Chr05: 36946163-36962327 Glycine max
Glyma.05G181600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36946163-36951162 Glycine max
Glyma.05G181600 10.0kb upstream 10.0kb upstream 21165 true Chr05: 36951163-36972327 Glycine max
Glyma.05G181600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36962328-36972327 Glycine max
Glyma.05G181600 10.0kb downstream 10.0kb downstream 21165 true Chr05: 36941163-36962327 Glycine max
Glyma.05G181600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36941163-36951162 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
122311347 5265 Fabidae View MSA
124063700 5270 Rosid View MSA
123740295 5271 Pentapetalae View MSA
122787406 5272 Eudicot View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.19431 0.0 19.536    
cufflinks 8.06614 0.0 22.0869    
cufflinks 2.70544 0.0 7.26543   Low
cufflinks 11.3439 0.0 32.137   High
cufflinks 9.37526 0.0 25.9773    
cufflinks 4.9697 0.0 13.292    
cufflinks 9.65465 0.0 26.8055    
cufflinks 9.4342 0.0 26.215    
cufflinks 7.19567 0.0 19.5526    
cufflinks 14.4     High High
cufflinks 1.105       Low
cufflinks 3.386        
cufflinks 7.923     High  
cufflinks 8.377     High  
cufflinks 2.782        
cufflinks 7.04        
cufflinks 3.133        
cufflinks 7.581     High  
cufflinks 7.088        
cufflinks 6.359        
cufflinks 2.037       Low
cufflinks 6.933        
cufflinks 7.158        
cufflinks 1.131       Low
cufflinks 5.515        
cufflinks 3.092        

0 Strain