Gene : Glyma.05G179300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31718:SF0 - EXPRESSED PROTEIN-RELATED Genomic Order:  1793
Name:  ? Glyma.05G179300 Secondary Identifier:  ? PAC:30524093
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G179300 0.5kb upstream 0.5kb upstream 1539 true Chr05: 36728540-36730078 Glycine max
Glyma.05G179300 0.5kb upstream 0.5kb upstream 500 false Chr05: 36728540-36729039 Glycine max
Glyma.05G179300 0.5kb downstream 0.5kb downstream 1539 true Chr05: 36729040-36730578 Glycine max
Glyma.05G179300 0.5kb downstream 0.5kb downstream 500 false Chr05: 36730079-36730578 Glycine max
Glyma.05G179300 1.0kb upstream 1.0kb upstream 2039 true Chr05: 36728040-36730078 Glycine max
Glyma.05G179300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36728040-36729039 Glycine max
Glyma.05G179300 1.0kb downstream 1.0kb downstream 2039 true Chr05: 36729040-36731078 Glycine max
Glyma.05G179300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36730079-36731078 Glycine max
Glyma.05G179300 2.0kb upstream 2.0kb upstream 3039 true Chr05: 36727040-36730078 Glycine max
Glyma.05G179300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36727040-36729039 Glycine max
Glyma.05G179300 2.0kb downstream 2.0kb downstream 3039 true Chr05: 36729040-36732078 Glycine max
Glyma.05G179300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36730079-36732078 Glycine max
Glyma.05G179300 5.0kb upstream 5.0kb upstream 6039 true Chr05: 36724040-36730078 Glycine max
Glyma.05G179300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36724040-36729039 Glycine max
Glyma.05G179300 5.0kb downstream 5.0kb downstream 6039 true Chr05: 36729040-36735078 Glycine max
Glyma.05G179300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36730079-36735078 Glycine max
Glyma.05G179300 10.0kb upstream 10.0kb upstream 11039 true Chr05: 36719040-36730078 Glycine max
Glyma.05G179300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36719040-36729039 Glycine max
Glyma.05G179300 10.0kb downstream 10.0kb downstream 11039 true Chr05: 36729040-36740078 Glycine max
Glyma.05G179300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36730079-36740078 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314171 5265 Fabidae View MSA
124065222 5270 Rosid View MSA
123742861 5271 Pentapetalae View MSA
122790879 5272 Eudicot View MSA
122048242 5273 Angiosperm View MSA
121351079 5274 Embryophyte View MSA
123381999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.154587 0.0 0.61886 Low Low
cufflinks 51.1701 0.0 137.006 High  
cufflinks 7.47952 0.0 22.88    
cufflinks 46.2939 0.0 123.706 High  
cufflinks 68.6101 0.0 187.208 High  
cufflinks 52.389 0.0 140.645 High  
cufflinks 36.9297 0.0 98.5265 High  
cufflinks 27.9589 0.0 74.982 High  
cufflinks 22.5136 0.0 60.8617 High  
cufflinks 156.142     High High
cufflinks 2.872        
cufflinks 9.655     High  
cufflinks 32.597     High High
cufflinks 56.339     High High
cufflinks 1.381       Low
cufflinks 6.76        
cufflinks 5.164        
cufflinks 22.853     High  
cufflinks 32.48     High High
cufflinks 3.332        
cufflinks 4.041        
cufflinks 4.539        
cufflinks 6.553        
cufflinks 2.228       Low
cufflinks 5.889        
cufflinks 7.219     High  

0 Strain