Gene : Glyma.05G179700 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  1797
Name:  ? Glyma.05G179700 Secondary Identifier:  ? PAC:30526645
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G179700 0.5kb upstream 0.5kb upstream 2984 true Chr05: 36744475-36747458 Glycine max
Glyma.05G179700 0.5kb upstream 0.5kb upstream 500 false Chr05: 36744475-36744974 Glycine max
Glyma.05G179700 0.5kb downstream 0.5kb downstream 2984 true Chr05: 36744975-36747958 Glycine max
Glyma.05G179700 0.5kb downstream 0.5kb downstream 500 false Chr05: 36747459-36747958 Glycine max
Glyma.05G179700 1.0kb upstream 1.0kb upstream 3484 true Chr05: 36743975-36747458 Glycine max
Glyma.05G179700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36743975-36744974 Glycine max
Glyma.05G179700 1.0kb downstream 1.0kb downstream 3484 true Chr05: 36744975-36748458 Glycine max
Glyma.05G179700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36747459-36748458 Glycine max
Glyma.05G179700 2.0kb upstream 2.0kb upstream 4484 true Chr05: 36742975-36747458 Glycine max
Glyma.05G179700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36742975-36744974 Glycine max
Glyma.05G179700 2.0kb downstream 2.0kb downstream 4484 true Chr05: 36744975-36749458 Glycine max
Glyma.05G179700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36747459-36749458 Glycine max
Glyma.05G179700 5.0kb upstream 5.0kb upstream 7484 true Chr05: 36739975-36747458 Glycine max
Glyma.05G179700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36739975-36744974 Glycine max
Glyma.05G179700 5.0kb downstream 5.0kb downstream 7484 true Chr05: 36744975-36752458 Glycine max
Glyma.05G179700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36747459-36752458 Glycine max
Glyma.05G179700 10.0kb upstream 10.0kb upstream 12484 true Chr05: 36734975-36747458 Glycine max
Glyma.05G179700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36734975-36744974 Glycine max
Glyma.05G179700 10.0kb downstream 10.0kb downstream 12484 true Chr05: 36744975-36757458 Glycine max
Glyma.05G179700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36747459-36757458 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311047 5265 Fabidae View MSA
124069975 5270 Rosid View MSA
123750267 5271 Pentapetalae View MSA
122794981 5272 Eudicot View MSA
122048174 5273 Angiosperm View MSA
121350948 5274 Embryophyte View MSA
123381944 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248537 0.0 0.938284   Low
cufflinks 1.34942 0.0 4.51696    
cufflinks 1.0948 0.0 3.7554    
cufflinks 1.84521 0.0 5.91019    
cufflinks 1.4129 0.0 4.69873    
cufflinks 1.82207 0.0 5.85787    
cufflinks 0.066651 0.0 0.265298 Low Low
cufflinks 3.17013 0.0 9.37672    
cufflinks 1.90279 0.0 6.06965    
cufflinks 0.428        
cufflinks 0.121       Low
cufflinks 1.05       High
cufflinks 0.22        
cufflinks 0.054     Low Low
cufflinks 0.311        
cufflinks 0.659        
cufflinks 0.095       Low
cufflinks 1.139       High
cufflinks 1.273       High
cufflinks 0.78        
cufflinks 0.123       Low
cufflinks 0.964        
cufflinks 0.68        
cufflinks 0.184        
cufflinks 0.825        
cufflinks 0.217        

0 Strain