Gene : Glyma.05G180200 G. max Wm82.a2.v1
Defline:  (1 of 31) PF04783 - Protein of unknown function (DUF630) (DUF630) Genomic Order:  1802
Name:  ? Glyma.05G180200 Secondary Identifier:  ? PAC:30524736
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G180200 0.5kb upstream 0.5kb upstream 6355 true Chr05: 36830045-36836399 Glycine max
Glyma.05G180200 0.5kb upstream 0.5kb upstream 500 false Chr05: 36835900-36836399 Glycine max
Glyma.05G180200 0.5kb downstream 0.5kb downstream 6355 true Chr05: 36829545-36835899 Glycine max
Glyma.05G180200 0.5kb downstream 0.5kb downstream 500 false Chr05: 36829545-36830044 Glycine max
Glyma.05G180200 1.0kb upstream 1.0kb upstream 6855 true Chr05: 36830045-36836899 Glycine max
Glyma.05G180200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36835900-36836899 Glycine max
Glyma.05G180200 1.0kb downstream 1.0kb downstream 6855 true Chr05: 36829045-36835899 Glycine max
Glyma.05G180200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36829045-36830044 Glycine max
Glyma.05G180200 2.0kb upstream 2.0kb upstream 7855 true Chr05: 36830045-36837899 Glycine max
Glyma.05G180200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36835900-36837899 Glycine max
Glyma.05G180200 2.0kb downstream 2.0kb downstream 7855 true Chr05: 36828045-36835899 Glycine max
Glyma.05G180200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36828045-36830044 Glycine max
Glyma.05G180200 5.0kb upstream 5.0kb upstream 10855 true Chr05: 36830045-36840899 Glycine max
Glyma.05G180200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36835900-36840899 Glycine max
Glyma.05G180200 5.0kb downstream 5.0kb downstream 10855 true Chr05: 36825045-36835899 Glycine max
Glyma.05G180200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36825045-36830044 Glycine max
Glyma.05G180200 10.0kb upstream 10.0kb upstream 15855 true Chr05: 36830045-36845899 Glycine max
Glyma.05G180200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36835900-36845899 Glycine max
Glyma.05G180200 10.0kb downstream 10.0kb downstream 15855 true Chr05: 36820045-36835899 Glycine max
Glyma.05G180200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36820045-36830044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301258 5265 Fabidae View MSA
124066962 5270 Rosid View MSA
123745138 5271 Pentapetalae View MSA
122787240 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.764 0.0 24.6235   Low
cufflinks 6.1181 0.0 25.4203    
cufflinks 12.1608 0.0 320.746   High
cufflinks 3.20258 0.0 19.4644    
cufflinks 4.04917 0.0 49.9867    
cufflinks 4.91258 0.0 85.4809    
cufflinks 10.0816 0.0 49.4358   High
cufflinks 2.81307 0.0 13.9185    
cufflinks 4.36698 0.0 44.4432    
cufflinks 0.427        
cufflinks 0.096       Low
cufflinks 0.458        
cufflinks 0.553        
cufflinks 0.703       High
cufflinks 0.112        
cufflinks 0.358        
cufflinks 0.082       Low
cufflinks 0.517        
cufflinks 1.776       High
cufflinks 0.197        
cufflinks 0.116        
cufflinks 0.261        
cufflinks 0.54        
cufflinks 0.073       Low
cufflinks 0.238        
cufflinks 0.133        

0 Strain