Gene : Glyma.05G208600 G. max Wm82.a2.v1
Defline:  (1 of 2) 6.3.2.37 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--D-lysine ligase / UDP-MurNAc-L-Ala-D-Glu:D-Lys ligase Genomic Order:  2086
Name:  ? Glyma.05G208600 Secondary Identifier:  ? PAC:30525414
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G208600 0.5kb upstream 0.5kb upstream 4548 true Chr05: 39054922-39059469 Glycine max
Glyma.05G208600 0.5kb upstream 0.5kb upstream 500 false Chr05: 39054922-39055421 Glycine max
Glyma.05G208600 0.5kb downstream 0.5kb downstream 4548 true Chr05: 39055422-39059969 Glycine max
Glyma.05G208600 0.5kb downstream 0.5kb downstream 500 false Chr05: 39059470-39059969 Glycine max
Glyma.05G208600 1.0kb upstream 1.0kb upstream 5048 true Chr05: 39054422-39059469 Glycine max
Glyma.05G208600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39054422-39055421 Glycine max
Glyma.05G208600 1.0kb downstream 1.0kb downstream 5048 true Chr05: 39055422-39060469 Glycine max
Glyma.05G208600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39059470-39060469 Glycine max
Glyma.05G208600 2.0kb upstream 2.0kb upstream 6048 true Chr05: 39053422-39059469 Glycine max
Glyma.05G208600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39053422-39055421 Glycine max
Glyma.05G208600 2.0kb downstream 2.0kb downstream 6048 true Chr05: 39055422-39061469 Glycine max
Glyma.05G208600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39059470-39061469 Glycine max
Glyma.05G208600 5.0kb upstream 5.0kb upstream 9048 true Chr05: 39050422-39059469 Glycine max
Glyma.05G208600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39050422-39055421 Glycine max
Glyma.05G208600 5.0kb downstream 5.0kb downstream 9048 true Chr05: 39055422-39064469 Glycine max
Glyma.05G208600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39059470-39064469 Glycine max
Glyma.05G208600 10.0kb upstream 10.0kb upstream 14048 true Chr05: 39045422-39059469 Glycine max
Glyma.05G208600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39045422-39055421 Glycine max
Glyma.05G208600 10.0kb downstream 10.0kb downstream 14048 true Chr05: 39055422-39069469 Glycine max
Glyma.05G208600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39059470-39069469 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307109 5265 Fabidae View MSA
124060443 5270 Rosid View MSA
123746707 5271 Pentapetalae View MSA
122792589 5272 Eudicot View MSA
122042880 5273 Angiosperm View MSA
121344951 5274 Embryophyte View MSA
123428207 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.2277 0.0 43.7883   High
cufflinks 6.73614 0.0 18.1508    
cufflinks 14.8592 0.0 39.9046   High
cufflinks 8.42575 0.0 22.5298    
cufflinks 6.93018 0.0 18.6234    
cufflinks 3.59644 0.0 10.13   Low
cufflinks 6.86001 0.0 18.4472    
cufflinks 11.1334 0.0 29.7093    
cufflinks 4.35004 0.0 12.0476   Low
cufflinks 6.174        
cufflinks 2.576       Low
cufflinks 13.175     High  
cufflinks 6.495        
cufflinks 7.606     High  
cufflinks 4.453        
cufflinks 13.758     High  
cufflinks 4.309        
cufflinks 9.063     High  
cufflinks 9.566     High  
cufflinks 19.323     High High
cufflinks 3.386       Low
cufflinks 17.103     High High
cufflinks 11.628     High  
cufflinks 3.832        
cufflinks 17.22     High High
cufflinks 2.897       Low

0 Strain