Gene : Glyma.05G209000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14499:SF11 - PROTEIN VM106R.1 Genomic Order:  2090
Name:  ? Glyma.05G209000 Secondary Identifier:  ? PAC:30524823
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G209000 0.5kb upstream 0.5kb upstream 1877 true Chr05: 39098576-39100452 Glycine max
Glyma.05G209000 0.5kb upstream 0.5kb upstream 500 false Chr05: 39099953-39100452 Glycine max
Glyma.05G209000 0.5kb downstream 0.5kb downstream 1877 true Chr05: 39098076-39099952 Glycine max
Glyma.05G209000 0.5kb downstream 0.5kb downstream 500 false Chr05: 39098076-39098575 Glycine max
Glyma.05G209000 1.0kb upstream 1.0kb upstream 2377 true Chr05: 39098576-39100952 Glycine max
Glyma.05G209000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39099953-39100952 Glycine max
Glyma.05G209000 1.0kb downstream 1.0kb downstream 2377 true Chr05: 39097576-39099952 Glycine max
Glyma.05G209000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39097576-39098575 Glycine max
Glyma.05G209000 2.0kb upstream 2.0kb upstream 3377 true Chr05: 39098576-39101952 Glycine max
Glyma.05G209000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39099953-39101952 Glycine max
Glyma.05G209000 2.0kb downstream 2.0kb downstream 3377 true Chr05: 39096576-39099952 Glycine max
Glyma.05G209000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39096576-39098575 Glycine max
Glyma.05G209000 5.0kb upstream 5.0kb upstream 6377 true Chr05: 39098576-39104952 Glycine max
Glyma.05G209000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39099953-39104952 Glycine max
Glyma.05G209000 5.0kb downstream 5.0kb downstream 6377 true Chr05: 39093576-39099952 Glycine max
Glyma.05G209000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39093576-39098575 Glycine max
Glyma.05G209000 10.0kb upstream 10.0kb upstream 11377 true Chr05: 39098576-39109952 Glycine max
Glyma.05G209000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39099953-39109952 Glycine max
Glyma.05G209000 10.0kb downstream 10.0kb downstream 11377 true Chr05: 39088576-39099952 Glycine max
Glyma.05G209000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39088576-39098575 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299845 5265 Fabidae View MSA
124060798 5270 Rosid View MSA
123737631 5271 Pentapetalae View MSA
122791240 5272 Eudicot View MSA
122042173 5273 Angiosperm View MSA
121348328 5274 Embryophyte View MSA
123380822 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7598 0.0 42.3762    
cufflinks 3.5189 0.0 11.1491    
cufflinks 47.4875 0.0 129.333 High High
cufflinks 1.6 0.0 5.57738   Low
cufflinks 6.3549 0.0 18.3489    
cufflinks 22.7745 0.0 60.7602   High
cufflinks 3.35098 0.0 10.6107    
cufflinks 3.25567 0.0 10.41    
cufflinks 6.09296 0.0 17.7804    
cufflinks 21.296     High  
cufflinks 32.43     High  
cufflinks 23.431     High  
cufflinks 18.712     High  
cufflinks 6.58        
cufflinks 13.593     High  
cufflinks 5.163       Low
cufflinks 88.273     High High
cufflinks 17.958     High  
cufflinks 6.467        
cufflinks 3.641       Low
cufflinks 20.398     High  
cufflinks 6.123        
cufflinks 9.777     High  
cufflinks 46.976     High High
cufflinks 4.366       Low
cufflinks 38.761     High High

0 Strain