Gene : Glyma.05G209700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11274 - RAD25/XP-B DNA REPAIR HELICASE Genomic Order:  2097
Name:  ? Glyma.05G209700 Secondary Identifier:  ? PAC:30523635
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G209700 0.5kb upstream 0.5kb upstream 8545 true Chr05: 39162093-39170637 Glycine max
Glyma.05G209700 0.5kb upstream 0.5kb upstream 500 false Chr05: 39162093-39162592 Glycine max
Glyma.05G209700 0.5kb downstream 0.5kb downstream 8545 true Chr05: 39162593-39171137 Glycine max
Glyma.05G209700 0.5kb downstream 0.5kb downstream 500 false Chr05: 39170638-39171137 Glycine max
Glyma.05G209700 1.0kb upstream 1.0kb upstream 9045 true Chr05: 39161593-39170637 Glycine max
Glyma.05G209700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39161593-39162592 Glycine max
Glyma.05G209700 1.0kb downstream 1.0kb downstream 9045 true Chr05: 39162593-39171637 Glycine max
Glyma.05G209700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39170638-39171637 Glycine max
Glyma.05G209700 2.0kb upstream 2.0kb upstream 10045 true Chr05: 39160593-39170637 Glycine max
Glyma.05G209700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39160593-39162592 Glycine max
Glyma.05G209700 2.0kb downstream 2.0kb downstream 10045 true Chr05: 39162593-39172637 Glycine max
Glyma.05G209700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39170638-39172637 Glycine max
Glyma.05G209700 5.0kb upstream 5.0kb upstream 13045 true Chr05: 39157593-39170637 Glycine max
Glyma.05G209700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39157593-39162592 Glycine max
Glyma.05G209700 5.0kb downstream 5.0kb downstream 13045 true Chr05: 39162593-39175637 Glycine max
Glyma.05G209700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39170638-39175637 Glycine max
Glyma.05G209700 10.0kb upstream 10.0kb upstream 18045 true Chr05: 39152593-39170637 Glycine max
Glyma.05G209700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39152593-39162592 Glycine max
Glyma.05G209700 10.0kb downstream 10.0kb downstream 18045 true Chr05: 39162593-39180637 Glycine max
Glyma.05G209700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39170638-39180637 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305482 5265 Fabidae View MSA
124062903 5270 Rosid View MSA
123738326 5271 Pentapetalae View MSA
122785903 5272 Eudicot View MSA
122045360 5273 Angiosperm View MSA
121345212 5274 Embryophyte View MSA
123424924 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.241 0.0 46.2271    
cufflinks 8.65446 0.0 30.6983   Low
cufflinks 14.1679 0.0 52.5889   High
cufflinks 13.1302 0.0 50.267    
cufflinks 8.68897 0.0 26.057   Low
cufflinks 9.48065 0.0 28.1996    
cufflinks 10.5634 0.0 31.3983    
cufflinks 10.478 0.0 36.798    
cufflinks 13.6443 0.0 51.339   High
cufflinks 1.438        
cufflinks 1.595        
cufflinks 2.827       High
cufflinks 1.63        
cufflinks 1.47        
cufflinks 2.845       High
cufflinks 1.448        
cufflinks 1.275        
cufflinks 3.157       High
cufflinks 1.904        
cufflinks 1.439        
cufflinks 1.329        
cufflinks 1.418        
cufflinks 1.025       Low
cufflinks 1.932        
cufflinks 1.387        
cufflinks 1.536        

0 Strain