Gene : Glyma.05G210300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11850//PTHR11850:SF66 - HOMEOBOX PROTEIN TRANSCRIPTION FACTORS Genomic Order:  2103
Name:  ? Glyma.05G210300 Secondary Identifier:  ? PAC:30524651
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G210300 0.5kb upstream 0.5kb upstream 4469 true Chr05: 39220807-39225275 Glycine max
Glyma.05G210300 0.5kb upstream 0.5kb upstream 500 false Chr05: 39220807-39221306 Glycine max
Glyma.05G210300 0.5kb downstream 0.5kb downstream 4469 true Chr05: 39221307-39225775 Glycine max
Glyma.05G210300 0.5kb downstream 0.5kb downstream 500 false Chr05: 39225276-39225775 Glycine max
Glyma.05G210300 1.0kb upstream 1.0kb upstream 4969 true Chr05: 39220307-39225275 Glycine max
Glyma.05G210300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39220307-39221306 Glycine max
Glyma.05G210300 1.0kb downstream 1.0kb downstream 4969 true Chr05: 39221307-39226275 Glycine max
Glyma.05G210300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39225276-39226275 Glycine max
Glyma.05G210300 2.0kb upstream 2.0kb upstream 5969 true Chr05: 39219307-39225275 Glycine max
Glyma.05G210300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39219307-39221306 Glycine max
Glyma.05G210300 2.0kb downstream 2.0kb downstream 5969 true Chr05: 39221307-39227275 Glycine max
Glyma.05G210300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39225276-39227275 Glycine max
Glyma.05G210300 5.0kb upstream 5.0kb upstream 8969 true Chr05: 39216307-39225275 Glycine max
Glyma.05G210300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39216307-39221306 Glycine max
Glyma.05G210300 5.0kb downstream 5.0kb downstream 8969 true Chr05: 39221307-39230275 Glycine max
Glyma.05G210300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39225276-39230275 Glycine max
Glyma.05G210300 10.0kb upstream 10.0kb upstream 13969 true Chr05: 39211307-39225275 Glycine max
Glyma.05G210300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39211307-39221306 Glycine max
Glyma.05G210300 10.0kb downstream 10.0kb downstream 13969 true Chr05: 39221307-39235275 Glycine max
Glyma.05G210300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39225276-39235275 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308400 5265 Fabidae View MSA
124068051 5270 Rosid View MSA
123740482 5271 Pentapetalae View MSA
122791610 5272 Eudicot View MSA
122049932 5273 Angiosperm View MSA
121350603 5274 Embryophyte View MSA
123426094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.9643 0.0 101.57 High High
cufflinks 0.48609 0.0 2.85831   Low
cufflinks 1.25483 0.0 6.1781    
cufflinks 0.375523 0.0 2.37272   Low
cufflinks 5.99026 0.0 25.6776    
cufflinks 7.46585 0.0 29.3245    
cufflinks 0.673875 0.0 3.76006    
cufflinks 1.76574 0.0 10.096    
cufflinks 14.3809 0.0 54.9728   High
cufflinks 0.024     Low Low
cufflinks 1.859       High
cufflinks 0.243        
cufflinks 1.095        
cufflinks 0.1       Low
cufflinks 1.351        
cufflinks 0.326        
cufflinks 1.88       High
cufflinks 0.343        
cufflinks 0.066     Low Low
cufflinks 0.481        
cufflinks 1.537        
cufflinks 0.525        
cufflinks 0.271        
cufflinks 2.849       High
cufflinks 0.46        
cufflinks 1.111        

0 Strain