Gene : Glyma.05G212500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11972//PTHR11972:SF81 - NADPH OXIDASE Genomic Order:  2125
Name:  ? Glyma.05G212500 Secondary Identifier:  ? PAC:30527600
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G212500 0.5kb upstream 0.5kb upstream 9289 true Chr05: 39399890-39409178 Glycine max
Glyma.05G212500 0.5kb upstream 0.5kb upstream 500 false Chr05: 39399890-39400389 Glycine max
Glyma.05G212500 0.5kb downstream 0.5kb downstream 9289 true Chr05: 39400390-39409678 Glycine max
Glyma.05G212500 0.5kb downstream 0.5kb downstream 500 false Chr05: 39409179-39409678 Glycine max
Glyma.05G212500 1.0kb upstream 1.0kb upstream 9789 true Chr05: 39399390-39409178 Glycine max
Glyma.05G212500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39399390-39400389 Glycine max
Glyma.05G212500 1.0kb downstream 1.0kb downstream 9789 true Chr05: 39400390-39410178 Glycine max
Glyma.05G212500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39409179-39410178 Glycine max
Glyma.05G212500 2.0kb upstream 2.0kb upstream 10789 true Chr05: 39398390-39409178 Glycine max
Glyma.05G212500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39398390-39400389 Glycine max
Glyma.05G212500 2.0kb downstream 2.0kb downstream 10789 true Chr05: 39400390-39411178 Glycine max
Glyma.05G212500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39409179-39411178 Glycine max
Glyma.05G212500 5.0kb upstream 5.0kb upstream 13789 true Chr05: 39395390-39409178 Glycine max
Glyma.05G212500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39395390-39400389 Glycine max
Glyma.05G212500 5.0kb downstream 5.0kb downstream 13789 true Chr05: 39400390-39414178 Glycine max
Glyma.05G212500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39409179-39414178 Glycine max
Glyma.05G212500 10.0kb upstream 10.0kb upstream 18789 true Chr05: 39390390-39409178 Glycine max
Glyma.05G212500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39390390-39400389 Glycine max
Glyma.05G212500 10.0kb downstream 10.0kb downstream 18789 true Chr05: 39400390-39419178 Glycine max
Glyma.05G212500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39409179-39419178 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306520 5265 Fabidae View MSA
124068511 5270 Rosid View MSA
123750784 5271 Pentapetalae View MSA
122788657 5272 Eudicot View MSA
122049816 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55223 0.0 4.67654   Low
cufflinks 1.32696 0.0 4.09489   Low
cufflinks 4.04213 0.0 11.0066    
cufflinks 9.30176 0.0 24.8703   High
cufflinks 4.18864 0.0 11.3611    
cufflinks 9.68609 0.0 25.9296   High
cufflinks 8.67097 0.0 23.1529    
cufflinks 6.59563 0.0 17.6147    
cufflinks 3.16976 0.0 8.77768    
cufflinks 3.915       High
cufflinks 1.017        
cufflinks 1.763        
cufflinks 2.741       High
cufflinks 1.053        
cufflinks 0.476       Low
cufflinks 0.631        
cufflinks 1.786        
cufflinks 0.892        
cufflinks 0.801        
cufflinks 0.355       Low
cufflinks 1.128        
cufflinks 0.482       Low
cufflinks 0.54        
cufflinks 1.211        
cufflinks 0.468       Low
cufflinks 1.509        

0 Strain