Gene : Glyma.05G213300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31827:SF14 - F22C12.10 Genomic Order:  2133
Name:  ? Glyma.05G213300 Secondary Identifier:  ? PAC:30525501
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G213300 0.5kb upstream 0.5kb upstream 6779 true Chr05: 39478709-39485487 Glycine max
Glyma.05G213300 0.5kb upstream 0.5kb upstream 500 false Chr05: 39484988-39485487 Glycine max
Glyma.05G213300 0.5kb downstream 0.5kb downstream 6779 true Chr05: 39478209-39484987 Glycine max
Glyma.05G213300 0.5kb downstream 0.5kb downstream 500 false Chr05: 39478209-39478708 Glycine max
Glyma.05G213300 1.0kb upstream 1.0kb upstream 7279 true Chr05: 39478709-39485987 Glycine max
Glyma.05G213300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39484988-39485987 Glycine max
Glyma.05G213300 1.0kb downstream 1.0kb downstream 7279 true Chr05: 39477709-39484987 Glycine max
Glyma.05G213300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39477709-39478708 Glycine max
Glyma.05G213300 2.0kb upstream 2.0kb upstream 8279 true Chr05: 39478709-39486987 Glycine max
Glyma.05G213300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39484988-39486987 Glycine max
Glyma.05G213300 2.0kb downstream 2.0kb downstream 8279 true Chr05: 39476709-39484987 Glycine max
Glyma.05G213300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39476709-39478708 Glycine max
Glyma.05G213300 5.0kb upstream 5.0kb upstream 11279 true Chr05: 39478709-39489987 Glycine max
Glyma.05G213300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39484988-39489987 Glycine max
Glyma.05G213300 5.0kb downstream 5.0kb downstream 11279 true Chr05: 39473709-39484987 Glycine max
Glyma.05G213300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39473709-39478708 Glycine max
Glyma.05G213300 10.0kb upstream 10.0kb upstream 16279 true Chr05: 39478709-39494987 Glycine max
Glyma.05G213300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39484988-39494987 Glycine max
Glyma.05G213300 10.0kb downstream 10.0kb downstream 16279 true Chr05: 39468709-39484987 Glycine max
Glyma.05G213300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39468709-39478708 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308879 5265 Fabidae View MSA
124063644 5270 Rosid View MSA
123750482 5271 Pentapetalae View MSA
122790555 5272 Eudicot View MSA
122043737 5273 Angiosperm View MSA
121310180 5274 Embryophyte View MSA
123426398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1203 0.0 57.5949    
cufflinks 6.41921 0.0 25.0805   Low
cufflinks 22.877 0.0 88.024 High High
cufflinks 14.0075 0.0 55.2017    
cufflinks 11.5964 0.0 44.4195    
cufflinks 6.93784 0.0 24.053   Low
cufflinks 16.2184 0.0 58.1026    
cufflinks 9.11439 0.0 31.2739    
cufflinks 14.1866 0.0 55.3115    
cufflinks 1.632       Low
cufflinks 9.742     High High
cufflinks 4.843        
cufflinks 2.048       Low
cufflinks 2.437        
cufflinks 22.903     High High
cufflinks 3.884        
cufflinks 3.636        
cufflinks 4.114        
cufflinks 2.418        
cufflinks 3.786        
cufflinks 13.741     High High
cufflinks 3.523        
cufflinks 2.833        
cufflinks 6.83     High  
cufflinks 4.011        
cufflinks 8.092     High  

0 Strain