Gene : Glyma.05G213400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF49 - NUCLEOPORIN-RELATED Genomic Order:  2134
Name:  ? Glyma.05G213400 Secondary Identifier:  ? PAC:30525404
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G213400 0.5kb upstream 0.5kb upstream 1286 true Chr05: 39493245-39494530 Glycine max
Glyma.05G213400 0.5kb upstream 0.5kb upstream 500 false Chr05: 39494031-39494530 Glycine max
Glyma.05G213400 0.5kb downstream 0.5kb downstream 1286 true Chr05: 39492745-39494030 Glycine max
Glyma.05G213400 0.5kb downstream 0.5kb downstream 500 false Chr05: 39492745-39493244 Glycine max
Glyma.05G213400 1.0kb upstream 1.0kb upstream 1786 true Chr05: 39493245-39495030 Glycine max
Glyma.05G213400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39494031-39495030 Glycine max
Glyma.05G213400 1.0kb downstream 1.0kb downstream 1786 true Chr05: 39492245-39494030 Glycine max
Glyma.05G213400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39492245-39493244 Glycine max
Glyma.05G213400 2.0kb upstream 2.0kb upstream 2786 true Chr05: 39493245-39496030 Glycine max
Glyma.05G213400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39494031-39496030 Glycine max
Glyma.05G213400 2.0kb downstream 2.0kb downstream 2786 true Chr05: 39491245-39494030 Glycine max
Glyma.05G213400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39491245-39493244 Glycine max
Glyma.05G213400 5.0kb upstream 5.0kb upstream 5786 true Chr05: 39493245-39499030 Glycine max
Glyma.05G213400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39494031-39499030 Glycine max
Glyma.05G213400 5.0kb downstream 5.0kb downstream 5786 true Chr05: 39488245-39494030 Glycine max
Glyma.05G213400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39488245-39493244 Glycine max
Glyma.05G213400 10.0kb upstream 10.0kb upstream 10786 true Chr05: 39493245-39504030 Glycine max
Glyma.05G213400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39494031-39504030 Glycine max
Glyma.05G213400 10.0kb downstream 10.0kb downstream 10786 true Chr05: 39483245-39494030 Glycine max
Glyma.05G213400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39483245-39493244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302483 5265 Fabidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.446603 0.0 1.73613    
cufflinks 53.4573 0.0 142.679 High High
cufflinks 1.03393 0.0 3.86525    
cufflinks 0.428326 0.0 1.66644    
cufflinks 0.280655 0.0 1.10825    
cufflinks 0.427249 0.0 1.66298    
cufflinks 1.04253 0.0 3.89888    
cufflinks 5.803       High
cufflinks 0.173        
cufflinks 0.281        
cufflinks 1.727       High
cufflinks 0.956        
cufflinks 0.05     Low Low
cufflinks 0.09     Low  
cufflinks 0.426        
cufflinks 0.833        
cufflinks 0.185        
cufflinks 0.069     Low  
cufflinks 0.272        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low Low
cufflinks 0.294        
cufflinks 0.043     Low Low
cufflinks 0.479        

0 Strain