Gene : Glyma.05G213600 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03417 - Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase (AAT) Genomic Order:  2136
Name:  ? Glyma.05G213600 Secondary Identifier:  ? PAC:30524985
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G213600 0.5kb upstream 0.5kb upstream 3013 true Chr05: 39500730-39503742 Glycine max
Glyma.05G213600 0.5kb upstream 0.5kb upstream 500 false Chr05: 39503243-39503742 Glycine max
Glyma.05G213600 0.5kb downstream 0.5kb downstream 3013 true Chr05: 39500230-39503242 Glycine max
Glyma.05G213600 0.5kb downstream 0.5kb downstream 500 false Chr05: 39500230-39500729 Glycine max
Glyma.05G213600 1.0kb upstream 1.0kb upstream 3513 true Chr05: 39500730-39504242 Glycine max
Glyma.05G213600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39503243-39504242 Glycine max
Glyma.05G213600 1.0kb downstream 1.0kb downstream 3513 true Chr05: 39499730-39503242 Glycine max
Glyma.05G213600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39499730-39500729 Glycine max
Glyma.05G213600 2.0kb upstream 2.0kb upstream 4513 true Chr05: 39500730-39505242 Glycine max
Glyma.05G213600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39503243-39505242 Glycine max
Glyma.05G213600 2.0kb downstream 2.0kb downstream 4513 true Chr05: 39498730-39503242 Glycine max
Glyma.05G213600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39498730-39500729 Glycine max
Glyma.05G213600 5.0kb upstream 5.0kb upstream 7513 true Chr05: 39500730-39508242 Glycine max
Glyma.05G213600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39503243-39508242 Glycine max
Glyma.05G213600 5.0kb downstream 5.0kb downstream 7513 true Chr05: 39495730-39503242 Glycine max
Glyma.05G213600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39495730-39500729 Glycine max
Glyma.05G213600 10.0kb upstream 10.0kb upstream 12513 true Chr05: 39500730-39513242 Glycine max
Glyma.05G213600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39503243-39513242 Glycine max
Glyma.05G213600 10.0kb downstream 10.0kb downstream 12513 true Chr05: 39490730-39503242 Glycine max
Glyma.05G213600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39490730-39500729 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308149 5265 Fabidae View MSA
124070065 5270 Rosid View MSA
123742474 5271 Pentapetalae View MSA
122793918 5272 Eudicot View MSA
122048477 5273 Angiosperm View MSA
121348469 5274 Embryophyte View MSA
123380874 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.02401 0.0 23.0579   High
cufflinks 6.80262 0.0 19.9861    
cufflinks 1.53151 0.0 5.40754    
cufflinks 0.582517 0.0 2.17983   Low
cufflinks 4.57068 0.0 14.1617    
cufflinks 1.09305 0.0 3.95154    
cufflinks 1.78804 0.0 6.22634    
cufflinks 8.18713 0.0 23.4481   High
cufflinks 0.851145 0.0 3.12506   Low
cufflinks 5.728        
cufflinks 0.045     Low Low
cufflinks 1.169        
cufflinks 0.172        
cufflinks 0.564        
cufflinks 0.008     Low Low
cufflinks 16.324     High High
cufflinks 0.286        
cufflinks 3.356        
cufflinks 2.279        
cufflinks 23.712     High High
cufflinks 0.12        
cufflinks 16.512     High High
cufflinks 9.74     High  
cufflinks 0.023     Low Low
cufflinks 18.617     High High
cufflinks 0.231        

0 Strain