Gene : Glyma.05G206100 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0963//KOG0993 - Transcription factor/CCAAT displacement protein CDP1 // Rab5 GTPase effector Rabaptin-5 Genomic Order:  2061
Name:  ? Glyma.05G206100 Secondary Identifier:  ? PAC:30526030
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G206100 0.5kb upstream 0.5kb upstream 6061 true Chr05: 38890649-38896709 Glycine max
Glyma.05G206100 0.5kb upstream 0.5kb upstream 500 false Chr05: 38890649-38891148 Glycine max
Glyma.05G206100 0.5kb downstream 0.5kb downstream 6061 true Chr05: 38891149-38897209 Glycine max
Glyma.05G206100 0.5kb downstream 0.5kb downstream 500 false Chr05: 38896710-38897209 Glycine max
Glyma.05G206100 1.0kb upstream 1.0kb upstream 6561 true Chr05: 38890149-38896709 Glycine max
Glyma.05G206100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38890149-38891148 Glycine max
Glyma.05G206100 1.0kb downstream 1.0kb downstream 6561 true Chr05: 38891149-38897709 Glycine max
Glyma.05G206100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38896710-38897709 Glycine max
Glyma.05G206100 2.0kb upstream 2.0kb upstream 7561 true Chr05: 38889149-38896709 Glycine max
Glyma.05G206100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38889149-38891148 Glycine max
Glyma.05G206100 2.0kb downstream 2.0kb downstream 7561 true Chr05: 38891149-38898709 Glycine max
Glyma.05G206100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38896710-38898709 Glycine max
Glyma.05G206100 5.0kb upstream 5.0kb upstream 10561 true Chr05: 38886149-38896709 Glycine max
Glyma.05G206100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38886149-38891148 Glycine max
Glyma.05G206100 5.0kb downstream 5.0kb downstream 10561 true Chr05: 38891149-38901709 Glycine max
Glyma.05G206100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38896710-38901709 Glycine max
Glyma.05G206100 10.0kb upstream 10.0kb upstream 15561 true Chr05: 38881149-38896709 Glycine max
Glyma.05G206100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38881149-38891148 Glycine max
Glyma.05G206100 10.0kb downstream 10.0kb downstream 15561 true Chr05: 38891149-38906709 Glycine max
Glyma.05G206100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38896710-38906709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040955 5273 Angiosperm View MSA
122311542 5265 Fabidae View MSA
124066145 5270 Rosid View MSA
123747619 5271 Pentapetalae View MSA
122785648 5272 Eudicot View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.67041 0.0 6.13866    
cufflinks 4.46047 0.0 15.5952    
cufflinks 0.807491 0.0 2.77079   Low
cufflinks 3.19188 0.0 11.7394    
cufflinks 4.74298 0.0 16.6012    
cufflinks 3.22245 0.0 11.922    
cufflinks 3.35689 0.0 12.2506    
cufflinks 8.48443 0.0 30.1299   High
cufflinks 4.59633 0.0 13.8151    
cufflinks 5.354        
cufflinks 0.268       Low
cufflinks 1.483        
cufflinks 3.689        
cufflinks 3.048        
cufflinks 0.16       Low
cufflinks 4.276        
cufflinks 0.595        
cufflinks 4.739        
cufflinks 2.35        
cufflinks 4.764        
cufflinks 0.368       Low
cufflinks 5.131        
cufflinks 5.175        
cufflinks 0.22       Low
cufflinks 5.004        
cufflinks 0.907        

0 Strain