Gene : Glyma.05G206200 G. max Wm82.a2.v1
Defline:  (1 of 35) PF04525 - LURP-one-related (LOR) Genomic Order:  2062
Name:  ? Glyma.05G206200 Secondary Identifier:  ? PAC:30524366
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G206200 0.5kb upstream 0.5kb upstream 4670 true Chr05: 38904753-38909422 Glycine max
Glyma.05G206200 0.5kb upstream 0.5kb upstream 500 false Chr05: 38908923-38909422 Glycine max
Glyma.05G206200 0.5kb downstream 0.5kb downstream 4670 true Chr05: 38904253-38908922 Glycine max
Glyma.05G206200 0.5kb downstream 0.5kb downstream 500 false Chr05: 38904253-38904752 Glycine max
Glyma.05G206200 1.0kb upstream 1.0kb upstream 5170 true Chr05: 38904753-38909922 Glycine max
Glyma.05G206200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38908923-38909922 Glycine max
Glyma.05G206200 1.0kb downstream 1.0kb downstream 5170 true Chr05: 38903753-38908922 Glycine max
Glyma.05G206200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38903753-38904752 Glycine max
Glyma.05G206200 2.0kb upstream 2.0kb upstream 6170 true Chr05: 38904753-38910922 Glycine max
Glyma.05G206200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38908923-38910922 Glycine max
Glyma.05G206200 2.0kb downstream 2.0kb downstream 6170 true Chr05: 38902753-38908922 Glycine max
Glyma.05G206200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38902753-38904752 Glycine max
Glyma.05G206200 5.0kb upstream 5.0kb upstream 9170 true Chr05: 38904753-38913922 Glycine max
Glyma.05G206200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38908923-38913922 Glycine max
Glyma.05G206200 5.0kb downstream 5.0kb downstream 9170 true Chr05: 38899753-38908922 Glycine max
Glyma.05G206200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38899753-38904752 Glycine max
Glyma.05G206200 10.0kb upstream 10.0kb upstream 14170 true Chr05: 38904753-38918922 Glycine max
Glyma.05G206200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38908923-38918922 Glycine max
Glyma.05G206200 10.0kb downstream 10.0kb downstream 14170 true Chr05: 38894753-38908922 Glycine max
Glyma.05G206200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38894753-38904752 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.5411 0.0 11.6038   High
cufflinks 0.811686 0.0 3.00684    
cufflinks 0.128759 0.0 0.514408 Low Low
cufflinks 0.88494 0.0 3.26093    
cufflinks 1.69054 0.0 5.9926    
cufflinks 1.31358 0.0 4.73934    
cufflinks 0.0930967 0.0 0.377639 Low Low
cufflinks 1.29569 0.0 4.66968    
cufflinks 1.67215 0.0 5.9215    
cufflinks 0.747        
cufflinks 24.139     High High
cufflinks 0.086     Low Low
cufflinks 0.517        
cufflinks 0.163       Low
cufflinks 5.648     High  
cufflinks 0.64        
cufflinks 1.045        
cufflinks 0.173       Low
cufflinks 0.147       Low
cufflinks 0.632        
cufflinks 15.989     High High
cufflinks 0.944        
cufflinks 0.344        
cufflinks 13.528     High High
cufflinks 0.704        
cufflinks 12.622     High High

0 Strain