Gene : Glyma.05G206400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12814 - RNA-BINDING PROTEIN NOB1 Genomic Order:  2064
Name:  ? Glyma.05G206400 Secondary Identifier:  ? PAC:30525082
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G206400 0.5kb upstream 0.5kb upstream 3622 true Chr05: 38922576-38926197 Glycine max
Glyma.05G206400 0.5kb upstream 0.5kb upstream 500 false Chr05: 38925698-38926197 Glycine max
Glyma.05G206400 0.5kb downstream 0.5kb downstream 3622 true Chr05: 38922076-38925697 Glycine max
Glyma.05G206400 0.5kb downstream 0.5kb downstream 500 false Chr05: 38922076-38922575 Glycine max
Glyma.05G206400 1.0kb upstream 1.0kb upstream 4122 true Chr05: 38922576-38926697 Glycine max
Glyma.05G206400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38925698-38926697 Glycine max
Glyma.05G206400 1.0kb downstream 1.0kb downstream 4122 true Chr05: 38921576-38925697 Glycine max
Glyma.05G206400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38921576-38922575 Glycine max
Glyma.05G206400 2.0kb upstream 2.0kb upstream 5122 true Chr05: 38922576-38927697 Glycine max
Glyma.05G206400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38925698-38927697 Glycine max
Glyma.05G206400 2.0kb downstream 2.0kb downstream 5122 true Chr05: 38920576-38925697 Glycine max
Glyma.05G206400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38920576-38922575 Glycine max
Glyma.05G206400 5.0kb upstream 5.0kb upstream 8122 true Chr05: 38922576-38930697 Glycine max
Glyma.05G206400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38925698-38930697 Glycine max
Glyma.05G206400 5.0kb downstream 5.0kb downstream 8122 true Chr05: 38917576-38925697 Glycine max
Glyma.05G206400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38917576-38922575 Glycine max
Glyma.05G206400 10.0kb upstream 10.0kb upstream 13122 true Chr05: 38922576-38935697 Glycine max
Glyma.05G206400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38925698-38935697 Glycine max
Glyma.05G206400 10.0kb downstream 10.0kb downstream 13122 true Chr05: 38912576-38925697 Glycine max
Glyma.05G206400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38912576-38922575 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041459 5273 Angiosperm View MSA
122298978 5265 Fabidae View MSA
124063585 5270 Rosid View MSA
123741219 5271 Pentapetalae View MSA
122790969 5272 Eudicot View MSA
121349928 5274 Embryophyte View MSA
123425485 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.86852 0.0 18.6702    
cufflinks 7.17803 0.0 19.4698    
cufflinks 4.13741 0.0 11.7401   Low
cufflinks 6.50952 0.0 17.7504    
cufflinks 8.88914 0.0 23.8608    
cufflinks 5.21952 0.0 14.4776    
cufflinks 11.367 0.0 30.3451   High
cufflinks 6.79987 0.0 18.4829    
cufflinks 5.79697 0.0 15.9461    
cufflinks 5.393        
cufflinks 2.116       Low
cufflinks 6.306        
cufflinks 7.406     High High
cufflinks 10.231     High High
cufflinks 3.705        
cufflinks 4.989        
cufflinks 4.408        
cufflinks 5.197        
cufflinks 8.714     High High
cufflinks 4.29        
cufflinks 3.267        
cufflinks 4.38        
cufflinks 6.297        
cufflinks 3.005       Low
cufflinks 4.352        
cufflinks 3.525        

0 Strain