Gene : Glyma.05G208300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Genomic Order:  2083
Name:  ? Glyma.05G208300 Secondary Identifier:  ? PAC:30527249
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G208300 0.5kb upstream 0.5kb upstream 5165 true Chr05: 39031987-39037151 Glycine max
Glyma.05G208300 0.5kb upstream 0.5kb upstream 500 false Chr05: 39031987-39032486 Glycine max
Glyma.05G208300 0.5kb downstream 0.5kb downstream 5165 true Chr05: 39032487-39037651 Glycine max
Glyma.05G208300 0.5kb downstream 0.5kb downstream 500 false Chr05: 39037152-39037651 Glycine max
Glyma.05G208300 1.0kb upstream 1.0kb upstream 5665 true Chr05: 39031487-39037151 Glycine max
Glyma.05G208300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39031487-39032486 Glycine max
Glyma.05G208300 1.0kb downstream 1.0kb downstream 5665 true Chr05: 39032487-39038151 Glycine max
Glyma.05G208300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39037152-39038151 Glycine max
Glyma.05G208300 2.0kb upstream 2.0kb upstream 6665 true Chr05: 39030487-39037151 Glycine max
Glyma.05G208300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39030487-39032486 Glycine max
Glyma.05G208300 2.0kb downstream 2.0kb downstream 6665 true Chr05: 39032487-39039151 Glycine max
Glyma.05G208300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39037152-39039151 Glycine max
Glyma.05G208300 5.0kb upstream 5.0kb upstream 9665 true Chr05: 39027487-39037151 Glycine max
Glyma.05G208300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39027487-39032486 Glycine max
Glyma.05G208300 5.0kb downstream 5.0kb downstream 9665 true Chr05: 39032487-39042151 Glycine max
Glyma.05G208300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39037152-39042151 Glycine max
Glyma.05G208300 10.0kb upstream 10.0kb upstream 14665 true Chr05: 39022487-39037151 Glycine max
Glyma.05G208300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39022487-39032486 Glycine max
Glyma.05G208300 10.0kb downstream 10.0kb downstream 14665 true Chr05: 39032487-39047151 Glycine max
Glyma.05G208300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39037152-39047151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302099 5265 Fabidae View MSA
124074803 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.44649 0.0 24.3375    
cufflinks 0.603774 0.0 3.79803    
cufflinks 61.6014 0.0 290.362 High High
cufflinks 0.80413 0.0 4.41018    
cufflinks 4.4331 0.0 17.5922    
cufflinks 3.61816 0.0 14.7985    
cufflinks 0.201754 0.0 1.29354 Low Low
cufflinks 2.10819 0.0 8.68258    
cufflinks 5.37856 0.0 21.3075    
cufflinks 0.44        
cufflinks 3.228        
cufflinks 5.486       High
cufflinks 3.718        
cufflinks 2.206        
cufflinks 1.52        
cufflinks 0.086     Low Low
cufflinks 2.513        
cufflinks 1.002        
cufflinks 0.404        
cufflinks 0.057     Low Low
cufflinks 4.674        
cufflinks 0.177        
cufflinks 0.138       Low
cufflinks 8.508     High High
cufflinks 0.065     Low Low
cufflinks 3.322        

0 Strain