Gene : Glyma.05G199200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11073:SF1 - CALNEXIN 14D-RELATED Genomic Order:  1992
Name:  ? Glyma.05G199200 Secondary Identifier:  ? PAC:30524402
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G199200 0.5kb upstream 0.5kb upstream 4158 true Chr05: 38319066-38323223 Glycine max
Glyma.05G199200 0.5kb upstream 0.5kb upstream 500 false Chr05: 38322724-38323223 Glycine max
Glyma.05G199200 0.5kb downstream 0.5kb downstream 4158 true Chr05: 38318566-38322723 Glycine max
Glyma.05G199200 0.5kb downstream 0.5kb downstream 500 false Chr05: 38318566-38319065 Glycine max
Glyma.05G199200 1.0kb upstream 1.0kb upstream 4658 true Chr05: 38319066-38323723 Glycine max
Glyma.05G199200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38322724-38323723 Glycine max
Glyma.05G199200 1.0kb downstream 1.0kb downstream 4658 true Chr05: 38318066-38322723 Glycine max
Glyma.05G199200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38318066-38319065 Glycine max
Glyma.05G199200 2.0kb upstream 2.0kb upstream 5658 true Chr05: 38319066-38324723 Glycine max
Glyma.05G199200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38322724-38324723 Glycine max
Glyma.05G199200 2.0kb downstream 2.0kb downstream 5658 true Chr05: 38317066-38322723 Glycine max
Glyma.05G199200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38317066-38319065 Glycine max
Glyma.05G199200 5.0kb upstream 5.0kb upstream 8658 true Chr05: 38319066-38327723 Glycine max
Glyma.05G199200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38322724-38327723 Glycine max
Glyma.05G199200 5.0kb downstream 5.0kb downstream 8658 true Chr05: 38314066-38322723 Glycine max
Glyma.05G199200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38314066-38319065 Glycine max
Glyma.05G199200 10.0kb upstream 10.0kb upstream 13658 true Chr05: 38319066-38332723 Glycine max
Glyma.05G199200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38322724-38332723 Glycine max
Glyma.05G199200 10.0kb downstream 10.0kb downstream 13658 true Chr05: 38309066-38322723 Glycine max
Glyma.05G199200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38309066-38319065 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313038 5265 Fabidae View MSA
124065141 5270 Rosid View MSA
123737774 5271 Pentapetalae View MSA
122786584 5272 Eudicot View MSA
122045156 5273 Angiosperm View MSA
121344983 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 82.7247 0.0 264.87 High  
cufflinks 38.4146 0.0 108.96 High Low
cufflinks 40.342 0.0 115.385 High  
cufflinks 62.6375 0.0 191.292 High  
cufflinks 55.0424 0.0 164.277 High  
cufflinks 52.8503 0.0 156.792 High  
cufflinks 153.578 0.0 566.088 High High
cufflinks 45.3296 0.0 131.817 High  
cufflinks 58.1894 0.0 174.897 High  
cufflinks 33.253     High  
cufflinks 30.643     High  
cufflinks 38.564     High  
cufflinks 51.622     High High
cufflinks 58.351     High High
cufflinks 34.395     High  
cufflinks 21.051     High Low
cufflinks 24.768     High  
cufflinks 41.333     High  
cufflinks 35.493     High  
cufflinks 17.098     High Low
cufflinks 27.851     High  
cufflinks 23.073     High  
cufflinks 32.625     High  
cufflinks 34.649     High  
cufflinks 17.363     High Low
cufflinks 24.793     High  

0 Strain