Gene : Glyma.05G199700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  1997
Name:  ? Glyma.05G199700 Secondary Identifier:  ? PAC:30527242
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G199700 0.5kb upstream 0.5kb upstream 2759 true Chr05: 38345006-38347764 Glycine max
Glyma.05G199700 0.5kb upstream 0.5kb upstream 500 false Chr05: 38347265-38347764 Glycine max
Glyma.05G199700 0.5kb downstream 0.5kb downstream 2759 true Chr05: 38344506-38347264 Glycine max
Glyma.05G199700 0.5kb downstream 0.5kb downstream 500 false Chr05: 38344506-38345005 Glycine max
Glyma.05G199700 1.0kb upstream 1.0kb upstream 3259 true Chr05: 38345006-38348264 Glycine max
Glyma.05G199700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38347265-38348264 Glycine max
Glyma.05G199700 1.0kb downstream 1.0kb downstream 3259 true Chr05: 38344006-38347264 Glycine max
Glyma.05G199700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38344006-38345005 Glycine max
Glyma.05G199700 2.0kb upstream 2.0kb upstream 4259 true Chr05: 38345006-38349264 Glycine max
Glyma.05G199700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38347265-38349264 Glycine max
Glyma.05G199700 2.0kb downstream 2.0kb downstream 4259 true Chr05: 38343006-38347264 Glycine max
Glyma.05G199700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38343006-38345005 Glycine max
Glyma.05G199700 5.0kb upstream 5.0kb upstream 7259 true Chr05: 38345006-38352264 Glycine max
Glyma.05G199700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38347265-38352264 Glycine max
Glyma.05G199700 5.0kb downstream 5.0kb downstream 7259 true Chr05: 38340006-38347264 Glycine max
Glyma.05G199700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38340006-38345005 Glycine max
Glyma.05G199700 10.0kb upstream 10.0kb upstream 12259 true Chr05: 38345006-38357264 Glycine max
Glyma.05G199700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38347265-38357264 Glycine max
Glyma.05G199700 10.0kb downstream 10.0kb downstream 12259 true Chr05: 38335006-38347264 Glycine max
Glyma.05G199700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38335006-38345005 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309170 5265 Fabidae View MSA
124067897 5270 Rosid View MSA
123746981 5271 Pentapetalae View MSA
122786160 5272 Eudicot View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.035 0.0 74.817 High High
cufflinks 23.9443 0.0 64.0316 High High
cufflinks 3.90542 0.0 12.503    
cufflinks 9.6965 0.0 27.5125    
cufflinks 3.01985 0.0 10.0575    
cufflinks 2.43021 0.0 8.30167    
cufflinks 16.3022 0.0 44.3119    
cufflinks 5.98528 0.0 18.0841    
cufflinks 1.51272 0.0 5.38311   Low
cufflinks 7.021        
cufflinks 1.162        
cufflinks 2.625        
cufflinks 0.176       Low
cufflinks 0.059     Low Low
cufflinks 0.659        
cufflinks 23.288     High High
cufflinks 0.078       Low
cufflinks 4.759        
cufflinks 7.87     High  
cufflinks 20.926     High High
cufflinks 0.629        
cufflinks 15.861     High  
cufflinks 17.24     High High
cufflinks 0.777        
cufflinks 23.039     High High
cufflinks 0.171       Low

0 Strain