Gene : Glyma.05G200500 G. max Wm82.a2.v1
Defline:  (1 of 3) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  2005
Name:  ? Glyma.05G200500 Secondary Identifier:  ? PAC:30526535
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CHLOROPHYLL-SYN Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G200500 0.5kb upstream 0.5kb upstream 3631 true Chr05: 38415657-38419287 Glycine max
Glyma.05G200500 0.5kb upstream 0.5kb upstream 500 false Chr05: 38418788-38419287 Glycine max
Glyma.05G200500 0.5kb downstream 0.5kb downstream 3631 true Chr05: 38415157-38418787 Glycine max
Glyma.05G200500 0.5kb downstream 0.5kb downstream 500 false Chr05: 38415157-38415656 Glycine max
Glyma.05G200500 1.0kb upstream 1.0kb upstream 4131 true Chr05: 38415657-38419787 Glycine max
Glyma.05G200500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38418788-38419787 Glycine max
Glyma.05G200500 1.0kb downstream 1.0kb downstream 4131 true Chr05: 38414657-38418787 Glycine max
Glyma.05G200500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38414657-38415656 Glycine max
Glyma.05G200500 2.0kb upstream 2.0kb upstream 5131 true Chr05: 38415657-38420787 Glycine max
Glyma.05G200500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38418788-38420787 Glycine max
Glyma.05G200500 2.0kb downstream 2.0kb downstream 5131 true Chr05: 38413657-38418787 Glycine max
Glyma.05G200500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38413657-38415656 Glycine max
Glyma.05G200500 5.0kb upstream 5.0kb upstream 8131 true Chr05: 38415657-38423787 Glycine max
Glyma.05G200500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38418788-38423787 Glycine max
Glyma.05G200500 5.0kb downstream 5.0kb downstream 8131 true Chr05: 38410657-38418787 Glycine max
Glyma.05G200500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38410657-38415656 Glycine max
Glyma.05G200500 10.0kb upstream 10.0kb upstream 13131 true Chr05: 38415657-38428787 Glycine max
Glyma.05G200500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38418788-38428787 Glycine max
Glyma.05G200500 10.0kb downstream 10.0kb downstream 13131 true Chr05: 38405657-38418787 Glycine max
Glyma.05G200500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38405657-38415656 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303274 5265 Fabidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.0091 0.0 83.079   High
cufflinks 23.2239 0.0 92.9315 High High
cufflinks 3.80329 0.0 15.4177    
cufflinks 8.93131 0.0 37.9123    
cufflinks 2.51681 0.0 11.9998    
cufflinks 2.84205 0.0 12.7382    
cufflinks 13.7573 0.0 54.0829    
cufflinks 7.0796 0.0 28.4122    
cufflinks 0.626005 0.0 9.15175   Low
cufflinks 1.519        
cufflinks 0.023     Low  
cufflinks 1.34        
cufflinks 0.039     Low  
cufflinks 0.017     Low Low
cufflinks 0.016     Low Low
cufflinks 9.882     High High
cufflinks 0.016     Low Low
cufflinks 1.866        
cufflinks 3.854        
cufflinks 10.817     High High
cufflinks 0.029     Low  
cufflinks 10.383     High High
cufflinks 10.537     High High
cufflinks 0.009     Low Low
cufflinks 9.946     High High
cufflinks 0.023     Low  

0 Strain