Gene : Glyma.05G200800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF8 - AUXIN RESPONSE FACTOR 2 Genomic Order:  2008
Name:  ? Glyma.05G200800 Secondary Identifier:  ? PAC:30524094
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G200800 0.5kb upstream 0.5kb upstream 5805 true Chr05: 38462701-38468505 Glycine max
Glyma.05G200800 0.5kb upstream 0.5kb upstream 500 false Chr05: 38462701-38463200 Glycine max
Glyma.05G200800 0.5kb downstream 0.5kb downstream 5805 true Chr05: 38463201-38469005 Glycine max
Glyma.05G200800 0.5kb downstream 0.5kb downstream 500 false Chr05: 38468506-38469005 Glycine max
Glyma.05G200800 1.0kb upstream 1.0kb upstream 6305 true Chr05: 38462201-38468505 Glycine max
Glyma.05G200800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38462201-38463200 Glycine max
Glyma.05G200800 1.0kb downstream 1.0kb downstream 6305 true Chr05: 38463201-38469505 Glycine max
Glyma.05G200800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38468506-38469505 Glycine max
Glyma.05G200800 2.0kb upstream 2.0kb upstream 7305 true Chr05: 38461201-38468505 Glycine max
Glyma.05G200800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38461201-38463200 Glycine max
Glyma.05G200800 2.0kb downstream 2.0kb downstream 7305 true Chr05: 38463201-38470505 Glycine max
Glyma.05G200800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38468506-38470505 Glycine max
Glyma.05G200800 5.0kb upstream 5.0kb upstream 10305 true Chr05: 38458201-38468505 Glycine max
Glyma.05G200800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38458201-38463200 Glycine max
Glyma.05G200800 5.0kb downstream 5.0kb downstream 10305 true Chr05: 38463201-38473505 Glycine max
Glyma.05G200800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38468506-38473505 Glycine max
Glyma.05G200800 10.0kb upstream 10.0kb upstream 15305 true Chr05: 38453201-38468505 Glycine max
Glyma.05G200800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38453201-38463200 Glycine max
Glyma.05G200800 10.0kb downstream 10.0kb downstream 15305 true Chr05: 38463201-38478505 Glycine max
Glyma.05G200800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38468506-38478505 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300136 5265 Fabidae View MSA
124074204 5270 Rosid View MSA
123738265 5271 Pentapetalae View MSA
122792462 5272 Eudicot View MSA
122051461 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.0477 0.0 319.774 High High
cufflinks 68.1801 0.0 507.25 High High
cufflinks 37.7571 0.0 147.84 High  
cufflinks 42.8281 0.0 251.635 High  
cufflinks 28.2263 0.0 130.841 High  
cufflinks 15.0003 0.0 59.7006   Low
cufflinks 24.0434 0.0 124.161 High  
cufflinks 36.267 0.0 200.686 High  
cufflinks 24.5381 0.0 126.227 High  
cufflinks 7.911     High  
cufflinks 8.39     High  
cufflinks 6.103        
cufflinks 3.337       Low
cufflinks 1.996       Low
cufflinks 14.13     High  
cufflinks 18.849     High  
cufflinks 14.358     High  
cufflinks 5.629        
cufflinks 17.015     High  
cufflinks 19.894     High  
cufflinks 11.186     High  
cufflinks 20.763     High  
cufflinks 19.114     High  
cufflinks 6.208     High  
cufflinks 18.77     High  
cufflinks 18.038     High  

0 Strain