Gene : Glyma.05G201700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565:SF90 - TRANSCRIPTION FACTOR BHLH137 Genomic Order:  2017
Name:  ? Glyma.05G201700 Secondary Identifier:  ? PAC:30525108
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G201700 0.5kb upstream 0.5kb upstream 3947 true Chr05: 38530908-38534854 Glycine max
Glyma.05G201700 0.5kb upstream 0.5kb upstream 500 false Chr05: 38530908-38531407 Glycine max
Glyma.05G201700 0.5kb downstream 0.5kb downstream 3947 true Chr05: 38531408-38535354 Glycine max
Glyma.05G201700 0.5kb downstream 0.5kb downstream 500 false Chr05: 38534855-38535354 Glycine max
Glyma.05G201700 1.0kb upstream 1.0kb upstream 4447 true Chr05: 38530408-38534854 Glycine max
Glyma.05G201700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38530408-38531407 Glycine max
Glyma.05G201700 1.0kb downstream 1.0kb downstream 4447 true Chr05: 38531408-38535854 Glycine max
Glyma.05G201700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38534855-38535854 Glycine max
Glyma.05G201700 2.0kb upstream 2.0kb upstream 5447 true Chr05: 38529408-38534854 Glycine max
Glyma.05G201700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38529408-38531407 Glycine max
Glyma.05G201700 2.0kb downstream 2.0kb downstream 5447 true Chr05: 38531408-38536854 Glycine max
Glyma.05G201700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38534855-38536854 Glycine max
Glyma.05G201700 5.0kb upstream 5.0kb upstream 8447 true Chr05: 38526408-38534854 Glycine max
Glyma.05G201700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38526408-38531407 Glycine max
Glyma.05G201700 5.0kb downstream 5.0kb downstream 8447 true Chr05: 38531408-38539854 Glycine max
Glyma.05G201700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38534855-38539854 Glycine max
Glyma.05G201700 10.0kb upstream 10.0kb upstream 13447 true Chr05: 38521408-38534854 Glycine max
Glyma.05G201700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38521408-38531407 Glycine max
Glyma.05G201700 10.0kb downstream 10.0kb downstream 13447 true Chr05: 38531408-38544854 Glycine max
Glyma.05G201700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38534855-38544854 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253705 5265 Fabidae View MSA
124042709 5270 Rosid View MSA
123746913 5271 Pentapetalae View MSA
122796649 5272 Eudicot View MSA
122049789 5273 Angiosperm View MSA
121351233 5274 Embryophyte View MSA
123382070 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.187388 0.0 0.727608 Low Low
cufflinks 6.82676 0.0 26.7877   High
cufflinks 0.621754 0.0 2.85846    
cufflinks 2.13446 0.0 10.1256    
cufflinks 0.203737 0.0 1.00686 Low Low
cufflinks 0.796391 0.0 3.64093    
cufflinks 0.331563 0.0 1.63429    
cufflinks 1.28596 0.0 5.40072    
cufflinks 0.682156 0.0 3.08957    
cufflinks 0.138        
cufflinks 0.006     Low Low
cufflinks 0.204        
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.374        
cufflinks 0.022     Low Low
cufflinks 0.616       High
cufflinks 2.878       High
cufflinks 0.054     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.19        
cufflinks 0.57        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.113        
cufflinks 0.044     Low  

0 Strain