Gene : Glyma.05G202800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13169:SF3 - MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3 Genomic Order:  2028
Name:  ? Glyma.05G202800 Secondary Identifier:  ? PAC:30527020
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G202800 0.5kb upstream 0.5kb upstream 5925 true Chr05: 38635818-38641742 Glycine max
Glyma.05G202800 0.5kb upstream 0.5kb upstream 500 false Chr05: 38635818-38636317 Glycine max
Glyma.05G202800 0.5kb downstream 0.5kb downstream 5925 true Chr05: 38636318-38642242 Glycine max
Glyma.05G202800 0.5kb downstream 0.5kb downstream 500 false Chr05: 38641743-38642242 Glycine max
Glyma.05G202800 1.0kb upstream 1.0kb upstream 6425 true Chr05: 38635318-38641742 Glycine max
Glyma.05G202800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38635318-38636317 Glycine max
Glyma.05G202800 1.0kb downstream 1.0kb downstream 6425 true Chr05: 38636318-38642742 Glycine max
Glyma.05G202800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38641743-38642742 Glycine max
Glyma.05G202800 2.0kb upstream 2.0kb upstream 7425 true Chr05: 38634318-38641742 Glycine max
Glyma.05G202800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38634318-38636317 Glycine max
Glyma.05G202800 2.0kb downstream 2.0kb downstream 7425 true Chr05: 38636318-38643742 Glycine max
Glyma.05G202800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38641743-38643742 Glycine max
Glyma.05G202800 5.0kb upstream 5.0kb upstream 10425 true Chr05: 38631318-38641742 Glycine max
Glyma.05G202800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38631318-38636317 Glycine max
Glyma.05G202800 5.0kb downstream 5.0kb downstream 10425 true Chr05: 38636318-38646742 Glycine max
Glyma.05G202800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38641743-38646742 Glycine max
Glyma.05G202800 10.0kb upstream 10.0kb upstream 15425 true Chr05: 38626318-38641742 Glycine max
Glyma.05G202800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38626318-38636317 Glycine max
Glyma.05G202800 10.0kb downstream 10.0kb downstream 15425 true Chr05: 38636318-38651742 Glycine max
Glyma.05G202800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38641743-38651742 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300690 5265 Fabidae View MSA
124067947 5270 Rosid View MSA
123739636 5271 Pentapetalae View MSA
122787599 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6465 0.0 42.9588    
cufflinks 9.44538 0.0 27.2437    
cufflinks 27.5569 0.0 73.5927 High  
cufflinks 15.4486 0.0 42.399    
cufflinks 14.8619 0.0 40.9241    
cufflinks 48.8924 0.0 131.485 High High
cufflinks 5.92838 0.0 18.2504   Low
cufflinks 24.1694 0.0 64.7813 High  
cufflinks 17.5773 0.0 47.8048    
cufflinks 6.645        
cufflinks 7.322     High High
cufflinks 6.935        
cufflinks 6.445        
cufflinks 4.521        
cufflinks 4.906        
cufflinks 4.262        
cufflinks 4.189        
cufflinks 4.607        
cufflinks 3.434       Low
cufflinks 4.028        
cufflinks 7.623     High High
cufflinks 4.434        
cufflinks 2.907       Low
cufflinks 8.198     High High
cufflinks 4.323        
cufflinks 7.209     High High

0 Strain