Gene : Glyma.05G203800 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG3206 - Alpha-tubulin folding cofactor B Genomic Order:  2038
Name:  ? Glyma.05G203800 Secondary Identifier:  ? PAC:30527096
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G203800 0.5kb upstream 0.5kb upstream 5570 true Chr05: 38745054-38750623 Glycine max
Glyma.05G203800 0.5kb upstream 0.5kb upstream 500 false Chr05: 38745054-38745553 Glycine max
Glyma.05G203800 0.5kb downstream 0.5kb downstream 5570 true Chr05: 38745554-38751123 Glycine max
Glyma.05G203800 0.5kb downstream 0.5kb downstream 500 false Chr05: 38750624-38751123 Glycine max
Glyma.05G203800 1.0kb upstream 1.0kb upstream 6070 true Chr05: 38744554-38750623 Glycine max
Glyma.05G203800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38744554-38745553 Glycine max
Glyma.05G203800 1.0kb downstream 1.0kb downstream 6070 true Chr05: 38745554-38751623 Glycine max
Glyma.05G203800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38750624-38751623 Glycine max
Glyma.05G203800 2.0kb upstream 2.0kb upstream 7070 true Chr05: 38743554-38750623 Glycine max
Glyma.05G203800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38743554-38745553 Glycine max
Glyma.05G203800 2.0kb downstream 2.0kb downstream 7070 true Chr05: 38745554-38752623 Glycine max
Glyma.05G203800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38750624-38752623 Glycine max
Glyma.05G203800 5.0kb upstream 5.0kb upstream 10070 true Chr05: 38740554-38750623 Glycine max
Glyma.05G203800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38740554-38745553 Glycine max
Glyma.05G203800 5.0kb downstream 5.0kb downstream 10070 true Chr05: 38745554-38755623 Glycine max
Glyma.05G203800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38750624-38755623 Glycine max
Glyma.05G203800 10.0kb upstream 10.0kb upstream 15070 true Chr05: 38735554-38750623 Glycine max
Glyma.05G203800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38735554-38745553 Glycine max
Glyma.05G203800 10.0kb downstream 10.0kb downstream 15070 true Chr05: 38745554-38760623 Glycine max
Glyma.05G203800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38750624-38760623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305837 5265 Fabidae View MSA
124068884 5270 Rosid View MSA
123738129 5271 Pentapetalae View MSA
122795484 5272 Eudicot View MSA
122045722 5273 Angiosperm View MSA
121345954 5274 Embryophyte View MSA
123423760 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9538 0.0 68.3184    
cufflinks 20.4251 0.0 70.1936 High  
cufflinks 15.2048 0.0 53.0777   Low
cufflinks 31.8386 0.0 110.171 High  
cufflinks 30.0337 0.0 103.54 High  
cufflinks 26.1709 0.0 89.7496 High  
cufflinks 22.7138 0.0 77.5182 High  
cufflinks 54.2557 0.0 201.965 High High
cufflinks 21.9451 0.0 74.9509 High  
cufflinks 6.391       High
cufflinks 2.37        
cufflinks 2.099        
cufflinks 3.698       High
cufflinks 4.558       High
cufflinks 1.636       Low
cufflinks 2.326        
cufflinks 2.625        
cufflinks 2.604        
cufflinks 2.239        
cufflinks 2.411        
cufflinks 2.556        
cufflinks 2.284        
cufflinks 2.111        
cufflinks 2.858        
cufflinks 2.198        
cufflinks 2.197        

0 Strain