Gene : Glyma.05G195200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22952//PTHR22952:SF130 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  1952
Name:  ? Glyma.05G195200 Secondary Identifier:  ? PAC:30526383
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G195200 0.5kb upstream 0.5kb upstream 1358 true Chr05: 37952885-37954242 Glycine max
Glyma.05G195200 0.5kb upstream 0.5kb upstream 500 false Chr05: 37953743-37954242 Glycine max
Glyma.05G195200 0.5kb downstream 0.5kb downstream 1358 true Chr05: 37952385-37953742 Glycine max
Glyma.05G195200 0.5kb downstream 0.5kb downstream 500 false Chr05: 37952385-37952884 Glycine max
Glyma.05G195200 1.0kb upstream 1.0kb upstream 1858 true Chr05: 37952885-37954742 Glycine max
Glyma.05G195200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37953743-37954742 Glycine max
Glyma.05G195200 1.0kb downstream 1.0kb downstream 1858 true Chr05: 37951885-37953742 Glycine max
Glyma.05G195200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37951885-37952884 Glycine max
Glyma.05G195200 2.0kb upstream 2.0kb upstream 2858 true Chr05: 37952885-37955742 Glycine max
Glyma.05G195200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37953743-37955742 Glycine max
Glyma.05G195200 2.0kb downstream 2.0kb downstream 2858 true Chr05: 37950885-37953742 Glycine max
Glyma.05G195200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37950885-37952884 Glycine max
Glyma.05G195200 5.0kb upstream 5.0kb upstream 5858 true Chr05: 37952885-37958742 Glycine max
Glyma.05G195200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37953743-37958742 Glycine max
Glyma.05G195200 5.0kb downstream 5.0kb downstream 5858 true Chr05: 37947885-37953742 Glycine max
Glyma.05G195200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37947885-37952884 Glycine max
Glyma.05G195200 10.0kb upstream 10.0kb upstream 10858 true Chr05: 37952885-37963742 Glycine max
Glyma.05G195200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37953743-37963742 Glycine max
Glyma.05G195200 10.0kb downstream 10.0kb downstream 10858 true Chr05: 37942885-37953742 Glycine max
Glyma.05G195200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37942885-37952884 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306892 5265 Fabidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0475014 0.0 0.202427 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.18646 0.0 0.737889 Low  
cufflinks 0.164582 0.0 0.654859 Low  
cufflinks 0.836251 0.0 3.11124   High
cufflinks 0.177485 0.0 0.704884 Low  
cufflinks 0.0407162 0.0 0.175361 Low Low
cufflinks 0.0911758 0.0 0.371582 Low  
cufflinks 0.258725 0.0 1.01327 Low  
cufflinks 1.202        
cufflinks 22.944     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.256        
cufflinks 2.068        
cufflinks 7.079     High  
cufflinks 0.236        
cufflinks 35.432     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.145        
cufflinks 14.732     High High
cufflinks 0.078     Low Low
cufflinks 0.105        
cufflinks 2.614        
cufflinks 0.034     Low Low
cufflinks 33.002     High High

0 Strain