Gene : Glyma.05G195800 G. max Wm82.a2.v1
Genomic Order:  1958 Name:  ? Glyma.05G195800
Secondary Identifier:  ? PAC:30525636
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G195800 0.5kb upstream 0.5kb upstream 1766 true Chr05: 38008986-38010751 Glycine max
Glyma.05G195800 0.5kb upstream 0.5kb upstream 500 false Chr05: 38008986-38009485 Glycine max
Glyma.05G195800 0.5kb downstream 0.5kb downstream 1766 true Chr05: 38009486-38011251 Glycine max
Glyma.05G195800 0.5kb downstream 0.5kb downstream 500 false Chr05: 38010752-38011251 Glycine max
Glyma.05G195800 1.0kb upstream 1.0kb upstream 2266 true Chr05: 38008486-38010751 Glycine max
Glyma.05G195800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38008486-38009485 Glycine max
Glyma.05G195800 1.0kb downstream 1.0kb downstream 2266 true Chr05: 38009486-38011751 Glycine max
Glyma.05G195800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38010752-38011751 Glycine max
Glyma.05G195800 2.0kb upstream 2.0kb upstream 3266 true Chr05: 38007486-38010751 Glycine max
Glyma.05G195800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38007486-38009485 Glycine max
Glyma.05G195800 2.0kb downstream 2.0kb downstream 3266 true Chr05: 38009486-38012751 Glycine max
Glyma.05G195800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38010752-38012751 Glycine max
Glyma.05G195800 5.0kb upstream 5.0kb upstream 6266 true Chr05: 38004486-38010751 Glycine max
Glyma.05G195800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38004486-38009485 Glycine max
Glyma.05G195800 5.0kb downstream 5.0kb downstream 6266 true Chr05: 38009486-38015751 Glycine max
Glyma.05G195800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38010752-38015751 Glycine max
Glyma.05G195800 10.0kb upstream 10.0kb upstream 11266 true Chr05: 37999486-38010751 Glycine max
Glyma.05G195800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37999486-38009485 Glycine max
Glyma.05G195800 10.0kb downstream 10.0kb downstream 11266 true Chr05: 38009486-38020751 Glycine max
Glyma.05G195800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38010752-38020751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239361 5265 Fabidae Singleton cluster - no MSA
124065245 5270 Rosid View MSA
123748532 5271 Pentapetalae View MSA
122792835 5272 Eudicot View MSA
122046009 5273 Angiosperm View MSA
121345994 5274 Embryophyte View MSA
123380304 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.365947 0.0 6.81063    
cufflinks 0.138012 0.0 1.70198 Low  
cufflinks 0.0867773 0.0 0.575052 Low Low
cufflinks 2.09271 0.0 8.17994   High
cufflinks 0.730366 0.0 3.01548    
cufflinks 0.0885739 0.0 0.597142 Low Low
cufflinks 0.151464 0.0 0.926025 Low  
cufflinks 0.280048 0.0 1.88095    
cufflinks 0.237454 0.0 1.02125 Low  
cufflinks 0.263        
cufflinks 0.094        
cufflinks 0.188        
cufflinks 0.328        
cufflinks 0.177        
cufflinks 0.705       High
cufflinks 0.226        
cufflinks 0.069        
cufflinks 0.369       High
cufflinks 0.155        
cufflinks 0.183        
cufflinks 0.1        
cufflinks 0.166        
cufflinks 0.13        
cufflinks 0.03     Low Low
cufflinks 0.107        
cufflinks 0.019     Low Low

0 Strain