Gene : Glyma.05G197300 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02791//PF10537//PF15613//PF15614 - DDT domain (DDT) // ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  1973
Name:  ? Glyma.05G197300 Secondary Identifier:  ? PAC:30527341
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G197300 0.5kb upstream 0.5kb upstream 7325 true Chr05: 38154674-38161998 Glycine max
Glyma.05G197300 0.5kb upstream 0.5kb upstream 500 false Chr05: 38154674-38155173 Glycine max
Glyma.05G197300 0.5kb downstream 0.5kb downstream 7325 true Chr05: 38155174-38162498 Glycine max
Glyma.05G197300 0.5kb downstream 0.5kb downstream 500 false Chr05: 38161999-38162498 Glycine max
Glyma.05G197300 1.0kb upstream 1.0kb upstream 7825 true Chr05: 38154174-38161998 Glycine max
Glyma.05G197300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38154174-38155173 Glycine max
Glyma.05G197300 1.0kb downstream 1.0kb downstream 7825 true Chr05: 38155174-38162998 Glycine max
Glyma.05G197300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38161999-38162998 Glycine max
Glyma.05G197300 2.0kb upstream 2.0kb upstream 8825 true Chr05: 38153174-38161998 Glycine max
Glyma.05G197300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38153174-38155173 Glycine max
Glyma.05G197300 2.0kb downstream 2.0kb downstream 8825 true Chr05: 38155174-38163998 Glycine max
Glyma.05G197300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38161999-38163998 Glycine max
Glyma.05G197300 5.0kb upstream 5.0kb upstream 11825 true Chr05: 38150174-38161998 Glycine max
Glyma.05G197300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38150174-38155173 Glycine max
Glyma.05G197300 5.0kb downstream 5.0kb downstream 11825 true Chr05: 38155174-38166998 Glycine max
Glyma.05G197300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38161999-38166998 Glycine max
Glyma.05G197300 10.0kb upstream 10.0kb upstream 16825 true Chr05: 38145174-38161998 Glycine max
Glyma.05G197300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38145174-38155173 Glycine max
Glyma.05G197300 10.0kb downstream 10.0kb downstream 16825 true Chr05: 38155174-38171998 Glycine max
Glyma.05G197300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38161999-38171998 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301956 5265 Fabidae View MSA
124067702 5270 Rosid View MSA
123739620 5271 Pentapetalae View MSA
122786030 5272 Eudicot View MSA
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.83243 0.0 13.0655   Low
cufflinks 6.29382 0.0 22.2032    
cufflinks 7.88318 0.0 27.0244   High
cufflinks 5.49873 0.0 19.8709    
cufflinks 5.54225 0.0 20.0259    
cufflinks 4.61741 0.0 17.1868    
cufflinks 5.19801 0.0 16.6356    
cufflinks 4.03254 0.0 15.7198   Low
cufflinks 7.39601 0.0 22.5224   High
cufflinks 1.269        
cufflinks 0.947       Low
cufflinks 2.428       High
cufflinks 2.205       High
cufflinks 2.341       High
cufflinks 0.991       Low
cufflinks 1.329        
cufflinks 1.819        
cufflinks 2.6       High
cufflinks 2.319       High
cufflinks 1.023       Low
cufflinks 1.165        
cufflinks 1.325        
cufflinks 1.968        
cufflinks 1.358        
cufflinks 1.087       Low
cufflinks 1.602        

0 Strain