Gene : Glyma.05G198400 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  1984
Name:  ? Glyma.05G198400 Secondary Identifier:  ? PAC:30525327
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G198400 0.5kb upstream 0.5kb upstream 3163 true Chr05: 38262465-38265627 Glycine max
Glyma.05G198400 0.5kb upstream 0.5kb upstream 500 false Chr05: 38265128-38265627 Glycine max
Glyma.05G198400 0.5kb downstream 0.5kb downstream 3163 true Chr05: 38261965-38265127 Glycine max
Glyma.05G198400 0.5kb downstream 0.5kb downstream 500 false Chr05: 38261965-38262464 Glycine max
Glyma.05G198400 1.0kb upstream 1.0kb upstream 3663 true Chr05: 38262465-38266127 Glycine max
Glyma.05G198400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38265128-38266127 Glycine max
Glyma.05G198400 1.0kb downstream 1.0kb downstream 3663 true Chr05: 38261465-38265127 Glycine max
Glyma.05G198400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38261465-38262464 Glycine max
Glyma.05G198400 2.0kb upstream 2.0kb upstream 4663 true Chr05: 38262465-38267127 Glycine max
Glyma.05G198400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38265128-38267127 Glycine max
Glyma.05G198400 2.0kb downstream 2.0kb downstream 4663 true Chr05: 38260465-38265127 Glycine max
Glyma.05G198400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38260465-38262464 Glycine max
Glyma.05G198400 5.0kb upstream 5.0kb upstream 7663 true Chr05: 38262465-38270127 Glycine max
Glyma.05G198400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38265128-38270127 Glycine max
Glyma.05G198400 5.0kb downstream 5.0kb downstream 7663 true Chr05: 38257465-38265127 Glycine max
Glyma.05G198400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38257465-38262464 Glycine max
Glyma.05G198400 10.0kb upstream 10.0kb upstream 12663 true Chr05: 38262465-38275127 Glycine max
Glyma.05G198400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38265128-38275127 Glycine max
Glyma.05G198400 10.0kb downstream 10.0kb downstream 12663 true Chr05: 38252465-38265127 Glycine max
Glyma.05G198400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38252465-38262464 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309756 5265 Fabidae View MSA
124071796 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.192429 0.0 0.80261 Low  
cufflinks 0.662592 0.0 4.22494   High
cufflinks 0.129156 0.0 0.512912 Low  
cufflinks 0.255799 0.0 1.7647    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.233555 0.0 0.921776 Low  
cufflinks 0.113141 0.0 0.45946 Low Low
cufflinks 0.419194 0.0 2.12367   High
cufflinks 0.114556 0.0 0.487767 Low Low
cufflinks 0.014     Low  
cufflinks 0.014     Low  
cufflinks 0.012     Low  
cufflinks 0.01     Low  
cufflinks 0.004     Low  
cufflinks 0.003     Low Low
cufflinks 0.345       High
cufflinks 0.005     Low  
cufflinks 0.019     Low  
cufflinks 0.034     Low  
cufflinks 0.185       High
cufflinks 0.004     Low  
cufflinks 0.193       High
cufflinks 0.163       High
cufflinks 0.009     Low  
cufflinks 0.216       High
cufflinks 0.002     Low Low

0 Strain