Gene : Glyma.05G237600 G. max Wm82.a2.v1
Defline:  (1 of 14) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  2376
Name:  ? Glyma.05G237600 Secondary Identifier:  ? PAC:30526997
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G237600 0.5kb upstream 0.5kb upstream 2180 true Chr05: 41395492-41397671 Glycine max
Glyma.05G237600 0.5kb upstream 0.5kb upstream 500 false Chr05: 41395492-41395991 Glycine max
Glyma.05G237600 0.5kb downstream 0.5kb downstream 2180 true Chr05: 41395992-41398171 Glycine max
Glyma.05G237600 0.5kb downstream 0.5kb downstream 500 false Chr05: 41397672-41398171 Glycine max
Glyma.05G237600 1.0kb upstream 1.0kb upstream 2680 true Chr05: 41394992-41397671 Glycine max
Glyma.05G237600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41394992-41395991 Glycine max
Glyma.05G237600 1.0kb downstream 1.0kb downstream 2680 true Chr05: 41395992-41398671 Glycine max
Glyma.05G237600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41397672-41398671 Glycine max
Glyma.05G237600 2.0kb upstream 2.0kb upstream 3680 true Chr05: 41393992-41397671 Glycine max
Glyma.05G237600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41393992-41395991 Glycine max
Glyma.05G237600 2.0kb downstream 2.0kb downstream 3680 true Chr05: 41395992-41399671 Glycine max
Glyma.05G237600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41397672-41399671 Glycine max
Glyma.05G237600 5.0kb upstream 5.0kb upstream 6680 true Chr05: 41390992-41397671 Glycine max
Glyma.05G237600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41390992-41395991 Glycine max
Glyma.05G237600 5.0kb downstream 5.0kb downstream 6680 true Chr05: 41395992-41402671 Glycine max
Glyma.05G237600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41397672-41402671 Glycine max
Glyma.05G237600 10.0kb upstream 10.0kb upstream 11680 true Chr05: 41385992-41397671 Glycine max
Glyma.05G237600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41385992-41395991 Glycine max
Glyma.05G237600 10.0kb downstream 10.0kb downstream 11680 true Chr05: 41395992-41407671 Glycine max
Glyma.05G237600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41397672-41407671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239178 5265 Fabidae Singleton cluster - no MSA
124073728 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.651022 0.0 2.40192    
cufflinks 1.39104 0.0 4.87361    
cufflinks 0.305031 0.0 1.16419   Low
cufflinks 0.599153 0.0 2.21699    
cufflinks 0.66323 0.0 2.44313    
cufflinks 1.85629 0.0 6.31961   High
cufflinks 1.23514 0.0 4.37877    
cufflinks 0.730522 0.0 2.67373    
cufflinks 1.15416 0.0 4.09909    
cufflinks 0.934        
cufflinks 3.518       High
cufflinks 0.497       Low
cufflinks 0.778        
cufflinks 0.709        
cufflinks 2.399       High
cufflinks 0.897        
cufflinks 0.797        
cufflinks 0.986        
cufflinks 0.861        
cufflinks 1.099        
cufflinks 1.867        
cufflinks 1.038        
cufflinks 0.615       Low
cufflinks 3.413       High
cufflinks 1.078        
cufflinks 1.88        

0 Strain