Gene : Glyma.05G237800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12947:SF10 - AMSH-LIKE UBIQUITIN THIOESTERASE 1 Genomic Order:  2378
Name:  ? Glyma.05G237800 Secondary Identifier:  ? PAC:30526641
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G237800 0.5kb upstream 0.5kb upstream 6716 true Chr05: 41406807-41413522 Glycine max
Glyma.05G237800 0.5kb upstream 0.5kb upstream 500 false Chr05: 41413023-41413522 Glycine max
Glyma.05G237800 0.5kb downstream 0.5kb downstream 6716 true Chr05: 41406307-41413022 Glycine max
Glyma.05G237800 0.5kb downstream 0.5kb downstream 500 false Chr05: 41406307-41406806 Glycine max
Glyma.05G237800 1.0kb upstream 1.0kb upstream 7216 true Chr05: 41406807-41414022 Glycine max
Glyma.05G237800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41413023-41414022 Glycine max
Glyma.05G237800 1.0kb downstream 1.0kb downstream 7216 true Chr05: 41405807-41413022 Glycine max
Glyma.05G237800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41405807-41406806 Glycine max
Glyma.05G237800 2.0kb upstream 2.0kb upstream 8216 true Chr05: 41406807-41415022 Glycine max
Glyma.05G237800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41413023-41415022 Glycine max
Glyma.05G237800 2.0kb downstream 2.0kb downstream 8216 true Chr05: 41404807-41413022 Glycine max
Glyma.05G237800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41404807-41406806 Glycine max
Glyma.05G237800 5.0kb upstream 5.0kb upstream 11216 true Chr05: 41406807-41418022 Glycine max
Glyma.05G237800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41413023-41418022 Glycine max
Glyma.05G237800 5.0kb downstream 5.0kb downstream 11216 true Chr05: 41401807-41413022 Glycine max
Glyma.05G237800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41401807-41406806 Glycine max
Glyma.05G237800 10.0kb upstream 10.0kb upstream 16216 true Chr05: 41406807-41423022 Glycine max
Glyma.05G237800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41413023-41423022 Glycine max
Glyma.05G237800 10.0kb downstream 10.0kb downstream 16216 true Chr05: 41396807-41413022 Glycine max
Glyma.05G237800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41396807-41406806 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310109 5265 Fabidae View MSA
124064531 5270 Rosid View MSA
123740855 5271 Pentapetalae View MSA
122786605 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.17679 0.0 32.0799    
cufflinks 5.5549 0.0 21.9863    
cufflinks 9.30981 0.0 33.0704    
cufflinks 4.10791 0.0 14.9938   Low
cufflinks 5.23681 0.0 18.0445    
cufflinks 14.4419 0.0 50.2615   High
cufflinks 5.82337 0.0 19.5659    
cufflinks 6.71726 0.0 30.4759    
cufflinks 5.86521 0.0 19.6417    
cufflinks 0.724       Low
cufflinks 0.888        
cufflinks 0.948        
cufflinks 0.898        
cufflinks 0.727       Low
cufflinks 0.698       Low
cufflinks 0.756        
cufflinks 0.856        
cufflinks 0.919        
cufflinks 0.866        
cufflinks 0.899        
cufflinks 0.972        
cufflinks 0.897        
cufflinks 0.729       Low
cufflinks 1.201       High
cufflinks 0.733       Low
cufflinks 0.999       High

0 Strain