Gene : Glyma.05G238800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10350 - NUCLEAR PORE COMPLEX PROTEIN NUP155 Genomic Order:  2388
Name:  ? Glyma.05G238800 Secondary Identifier:  ? PAC:30526133
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G238800 0.5kb upstream 0.5kb upstream 10327 true Chr05: 41467979-41478305 Glycine max
Glyma.05G238800 0.5kb upstream 0.5kb upstream 500 false Chr05: 41477806-41478305 Glycine max
Glyma.05G238800 0.5kb downstream 0.5kb downstream 10327 true Chr05: 41467479-41477805 Glycine max
Glyma.05G238800 0.5kb downstream 0.5kb downstream 500 false Chr05: 41467479-41467978 Glycine max
Glyma.05G238800 1.0kb upstream 1.0kb upstream 10827 true Chr05: 41467979-41478805 Glycine max
Glyma.05G238800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41477806-41478805 Glycine max
Glyma.05G238800 1.0kb downstream 1.0kb downstream 10827 true Chr05: 41466979-41477805 Glycine max
Glyma.05G238800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41466979-41467978 Glycine max
Glyma.05G238800 2.0kb upstream 2.0kb upstream 11827 true Chr05: 41467979-41479805 Glycine max
Glyma.05G238800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41477806-41479805 Glycine max
Glyma.05G238800 2.0kb downstream 2.0kb downstream 11827 true Chr05: 41465979-41477805 Glycine max
Glyma.05G238800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41465979-41467978 Glycine max
Glyma.05G238800 5.0kb upstream 5.0kb upstream 14827 true Chr05: 41467979-41482805 Glycine max
Glyma.05G238800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41477806-41482805 Glycine max
Glyma.05G238800 5.0kb downstream 5.0kb downstream 14827 true Chr05: 41462979-41477805 Glycine max
Glyma.05G238800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41462979-41467978 Glycine max
Glyma.05G238800 10.0kb upstream 10.0kb upstream 19827 true Chr05: 41467979-41487805 Glycine max
Glyma.05G238800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41477806-41487805 Glycine max
Glyma.05G238800 10.0kb downstream 10.0kb downstream 19827 true Chr05: 41457979-41477805 Glycine max
Glyma.05G238800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41457979-41467978 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307236 5265 Fabidae View MSA
124061969 5270 Rosid View MSA
123736896 5271 Pentapetalae View MSA
122792710 5272 Eudicot View MSA
122046521 5273 Angiosperm View MSA
121344629 5274 Embryophyte View MSA
123428808 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75109 0.0 15.346    
cufflinks 6.1537 0.0 16.4173    
cufflinks 3.39763 0.0 9.20508   Low
cufflinks 7.05662 0.0 18.847    
cufflinks 6.88123 0.0 18.3706    
cufflinks 2.91773 0.0 7.99442   Low
cufflinks 10.2691 0.0 27.777   High
cufflinks 4.45017 0.0 11.9342    
cufflinks 4.82066 0.0 12.8969    
cufflinks 2.331        
cufflinks 1.341       Low
cufflinks 2.912        
cufflinks 3.53        
cufflinks 4.514       High
cufflinks 2.293        
cufflinks 3.305        
cufflinks 1.743       Low
cufflinks 3.22        
cufflinks 5.118       High
cufflinks 2.705        
cufflinks 1.703       Low
cufflinks 3.159        
cufflinks 3.93       High
cufflinks 1.665       Low
cufflinks 2.848        
cufflinks 1.823        

0 Strain