Gene : Glyma.05G240000 G. max Wm82.a2.v1
Defline:  (1 of 4) 6.3.5.7 - Glutaminyl-tRNA synthase (glutamine-hydrolyzing) / Glutamyl-tRNA(Gln) amidotransferase Genomic Order:  2400
Name:  ? Glyma.05G240000 Secondary Identifier:  ? PAC:30525556
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5921 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G240000 0.5kb upstream 0.5kb upstream 6719 true Chr05: 41530100-41536818 Glycine max
Glyma.05G240000 0.5kb upstream 0.5kb upstream 500 false Chr05: 41536319-41536818 Glycine max
Glyma.05G240000 0.5kb downstream 0.5kb downstream 6719 true Chr05: 41529600-41536318 Glycine max
Glyma.05G240000 0.5kb downstream 0.5kb downstream 500 false Chr05: 41529600-41530099 Glycine max
Glyma.05G240000 1.0kb upstream 1.0kb upstream 7219 true Chr05: 41530100-41537318 Glycine max
Glyma.05G240000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41536319-41537318 Glycine max
Glyma.05G240000 1.0kb downstream 1.0kb downstream 7219 true Chr05: 41529100-41536318 Glycine max
Glyma.05G240000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41529100-41530099 Glycine max
Glyma.05G240000 2.0kb upstream 2.0kb upstream 8219 true Chr05: 41530100-41538318 Glycine max
Glyma.05G240000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41536319-41538318 Glycine max
Glyma.05G240000 2.0kb downstream 2.0kb downstream 8219 true Chr05: 41528100-41536318 Glycine max
Glyma.05G240000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41528100-41530099 Glycine max
Glyma.05G240000 5.0kb upstream 5.0kb upstream 11219 true Chr05: 41530100-41541318 Glycine max
Glyma.05G240000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41536319-41541318 Glycine max
Glyma.05G240000 5.0kb downstream 5.0kb downstream 11219 true Chr05: 41525100-41536318 Glycine max
Glyma.05G240000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41525100-41530099 Glycine max
Glyma.05G240000 10.0kb upstream 10.0kb upstream 16219 true Chr05: 41530100-41546318 Glycine max
Glyma.05G240000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41536319-41546318 Glycine max
Glyma.05G240000 10.0kb downstream 10.0kb downstream 16219 true Chr05: 41520100-41536318 Glycine max
Glyma.05G240000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41520100-41530099 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304937 5265 Fabidae View MSA
124063179 5270 Rosid View MSA
123739880 5271 Pentapetalae View MSA
122793755 5272 Eudicot View MSA
122043391 5273 Angiosperm View MSA
121346505 5274 Embryophyte View MSA
123423998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.46899 0.0 22.8173   High
cufflinks 8.69635 0.0 23.3945   High
cufflinks 4.18422 0.0 11.8832    
cufflinks 5.36388 0.0 14.8629    
cufflinks 4.4109 0.0 12.5021    
cufflinks 3.03992 0.0 9.01495   Low
cufflinks 4.84982 0.0 13.6085    
cufflinks 4.05249 0.0 11.5696    
cufflinks 3.18884 0.0 9.39077   Low
cufflinks 1.962        
cufflinks 0.45       Low
cufflinks 2.25        
cufflinks 1.716        
cufflinks 2.214        
cufflinks 0.762        
cufflinks 7.963     High High
cufflinks 1.018        
cufflinks 2.94        
cufflinks 3.856        
cufflinks 9.072     High High
cufflinks 0.564       Low
cufflinks 8.374     High High
cufflinks 8.762     High High
cufflinks 0.433       Low
cufflinks 8.259     High High
cufflinks 0.999        

0 Strain