Gene : Glyma.05G240100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11592:SF33 - GLUTATHIONE PEROXIDASE 2-RELATED Genomic Order:  2401
Name:  ? Glyma.05G240100 Secondary Identifier:  ? PAC:30525471
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4081 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G240100 0.5kb upstream 0.5kb upstream 3773 true Chr05: 41537824-41541596 Glycine max
Glyma.05G240100 0.5kb upstream 0.5kb upstream 500 false Chr05: 41541097-41541596 Glycine max
Glyma.05G240100 0.5kb downstream 0.5kb downstream 3773 true Chr05: 41537324-41541096 Glycine max
Glyma.05G240100 0.5kb downstream 0.5kb downstream 500 false Chr05: 41537324-41537823 Glycine max
Glyma.05G240100 1.0kb upstream 1.0kb upstream 4273 true Chr05: 41537824-41542096 Glycine max
Glyma.05G240100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41541097-41542096 Glycine max
Glyma.05G240100 1.0kb downstream 1.0kb downstream 4273 true Chr05: 41536824-41541096 Glycine max
Glyma.05G240100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41536824-41537823 Glycine max
Glyma.05G240100 2.0kb upstream 2.0kb upstream 5273 true Chr05: 41537824-41543096 Glycine max
Glyma.05G240100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41541097-41543096 Glycine max
Glyma.05G240100 2.0kb downstream 2.0kb downstream 5273 true Chr05: 41535824-41541096 Glycine max
Glyma.05G240100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41535824-41537823 Glycine max
Glyma.05G240100 5.0kb upstream 5.0kb upstream 8273 true Chr05: 41537824-41546096 Glycine max
Glyma.05G240100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41541097-41546096 Glycine max
Glyma.05G240100 5.0kb downstream 5.0kb downstream 8273 true Chr05: 41532824-41541096 Glycine max
Glyma.05G240100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41532824-41537823 Glycine max
Glyma.05G240100 10.0kb upstream 10.0kb upstream 13273 true Chr05: 41537824-41551096 Glycine max
Glyma.05G240100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41541097-41551096 Glycine max
Glyma.05G240100 10.0kb downstream 10.0kb downstream 13273 true Chr05: 41527824-41541096 Glycine max
Glyma.05G240100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41527824-41537823 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300994 5265 Fabidae View MSA
124060403 5270 Rosid View MSA
123752336 5271 Pentapetalae View MSA
122792727 5272 Eudicot View MSA
122049273 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 68.5992 0.0 270.567 High  
cufflinks 20.5254 0.0 73.456 High Low
cufflinks 83.4902 0.0 344.386 High  
cufflinks 37.9095 0.0 146.695 High  
cufflinks 40.6142 0.0 153.629 High  
cufflinks 149.181 0.0 719.081 High High
cufflinks 14.1118 0.0 54.29   Low
cufflinks 61.0929 0.0 238.198 High  
cufflinks 42.5814 0.0 161.149 High  
cufflinks 3.837        
cufflinks 4.722        
cufflinks 8.057     High High
cufflinks 7.615     High High
cufflinks 5.3        
cufflinks 3.081        
cufflinks 2.938        
cufflinks 6.27     High  
cufflinks 4.806        
cufflinks 3.229        
cufflinks 2.503       Low
cufflinks 6.822     High High
cufflinks 3.47        
cufflinks 2.408       Low
cufflinks 6.913     High High
cufflinks 2.825       Low
cufflinks 4.758        

0 Strain