Gene : Glyma.05G240600 G. max Wm82.a2.v1
Defline:  (1 of 20) KOG4473 - Uncharacterized membrane protein Genomic Order:  2406
Name:  ? Glyma.05G240600 Secondary Identifier:  ? PAC:30527387
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G240600 0.5kb upstream 0.5kb upstream 3195 true Chr05: 41566791-41569985 Glycine max
Glyma.05G240600 0.5kb upstream 0.5kb upstream 500 false Chr05: 41569486-41569985 Glycine max
Glyma.05G240600 0.5kb downstream 0.5kb downstream 3195 true Chr05: 41566291-41569485 Glycine max
Glyma.05G240600 0.5kb downstream 0.5kb downstream 500 false Chr05: 41566291-41566790 Glycine max
Glyma.05G240600 1.0kb upstream 1.0kb upstream 3695 true Chr05: 41566791-41570485 Glycine max
Glyma.05G240600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41569486-41570485 Glycine max
Glyma.05G240600 1.0kb downstream 1.0kb downstream 3695 true Chr05: 41565791-41569485 Glycine max
Glyma.05G240600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41565791-41566790 Glycine max
Glyma.05G240600 2.0kb upstream 2.0kb upstream 4695 true Chr05: 41566791-41571485 Glycine max
Glyma.05G240600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41569486-41571485 Glycine max
Glyma.05G240600 2.0kb downstream 2.0kb downstream 4695 true Chr05: 41564791-41569485 Glycine max
Glyma.05G240600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41564791-41566790 Glycine max
Glyma.05G240600 5.0kb upstream 5.0kb upstream 7695 true Chr05: 41566791-41574485 Glycine max
Glyma.05G240600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41569486-41574485 Glycine max
Glyma.05G240600 5.0kb downstream 5.0kb downstream 7695 true Chr05: 41561791-41569485 Glycine max
Glyma.05G240600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41561791-41566790 Glycine max
Glyma.05G240600 10.0kb upstream 10.0kb upstream 12695 true Chr05: 41566791-41579485 Glycine max
Glyma.05G240600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41569486-41579485 Glycine max
Glyma.05G240600 10.0kb downstream 10.0kb downstream 12695 true Chr05: 41556791-41569485 Glycine max
Glyma.05G240600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41556791-41566790 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304992 5265 Fabidae View MSA
124062648 5270 Rosid View MSA
123736960 5271 Pentapetalae View MSA
122790117 5272 Eudicot View MSA
122043117 5273 Angiosperm View MSA
121348483 5274 Embryophyte View MSA
123428360 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.641 0.0 65.8932 High High
cufflinks 8.02876 0.0 23.4837    
cufflinks 2.6605 0.0 9.06815   Low
cufflinks 4.83956 0.0 15.1607    
cufflinks 5.4154 0.0 16.591    
cufflinks 3.43161 0.0 11.2395    
cufflinks 7.21834 0.0 21.3329    
cufflinks 7.35979 0.0 21.7113    
cufflinks 6.05336 0.0 18.3327    
cufflinks 2.623        
cufflinks 2.225        
cufflinks 1.719       Low
cufflinks 2.134        
cufflinks 2.769        
cufflinks 3.04        
cufflinks 6.633       High
cufflinks 1.305       Low
cufflinks 2.981        
cufflinks 3.98        
cufflinks 7.406     High High
cufflinks 3.355        
cufflinks 6.547       High
cufflinks 5.937       High
cufflinks 2.668        
cufflinks 5.834       High
cufflinks 1.22       Low

0 Strain