Gene : Glyma.05G241700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31029:SF4 - F5O11.6 Genomic Order:  2417
Name:  ? Glyma.05G241700 Secondary Identifier:  ? PAC:30524551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G241700 0.5kb upstream 0.5kb upstream 2386 true Chr05: 41682476-41684861 Glycine max
Glyma.05G241700 0.5kb upstream 0.5kb upstream 500 false Chr05: 41684362-41684861 Glycine max
Glyma.05G241700 0.5kb downstream 0.5kb downstream 2386 true Chr05: 41681976-41684361 Glycine max
Glyma.05G241700 0.5kb downstream 0.5kb downstream 500 false Chr05: 41681976-41682475 Glycine max
Glyma.05G241700 1.0kb upstream 1.0kb upstream 2886 true Chr05: 41682476-41685361 Glycine max
Glyma.05G241700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41684362-41685361 Glycine max
Glyma.05G241700 1.0kb downstream 1.0kb downstream 2886 true Chr05: 41681476-41684361 Glycine max
Glyma.05G241700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41681476-41682475 Glycine max
Glyma.05G241700 2.0kb upstream 2.0kb upstream 3886 true Chr05: 41682476-41686361 Glycine max
Glyma.05G241700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41684362-41686361 Glycine max
Glyma.05G241700 2.0kb downstream 2.0kb downstream 3886 true Chr05: 41680476-41684361 Glycine max
Glyma.05G241700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41680476-41682475 Glycine max
Glyma.05G241700 5.0kb upstream 5.0kb upstream 6886 true Chr05: 41682476-41689361 Glycine max
Glyma.05G241700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41684362-41689361 Glycine max
Glyma.05G241700 5.0kb downstream 5.0kb downstream 6886 true Chr05: 41677476-41684361 Glycine max
Glyma.05G241700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41677476-41682475 Glycine max
Glyma.05G241700 10.0kb upstream 10.0kb upstream 11886 true Chr05: 41682476-41694361 Glycine max
Glyma.05G241700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41684362-41694361 Glycine max
Glyma.05G241700 10.0kb downstream 10.0kb downstream 11886 true Chr05: 41672476-41684361 Glycine max
Glyma.05G241700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41672476-41682475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315964 5265 Fabidae View MSA
124067611 5270 Rosid View MSA
123751802 5271 Pentapetalae View MSA
122793081 5272 Eudicot View MSA
122049110 5273 Angiosperm View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.34217 0.0 7.48579    
cufflinks 9.76894 0.0 26.5083   High
cufflinks 1.97651 0.0 6.48555    
cufflinks 3.60661 0.0 10.8399    
cufflinks 1.09998 0.0 3.83788    
cufflinks 1.34268 0.0 4.60228    
cufflinks 4.65091 0.0 13.4889    
cufflinks 0.502335 0.0 1.84956   Low
cufflinks 1.76619 0.0 5.86084    
cufflinks 0.484        
cufflinks 0.02     Low Low
cufflinks 3.995        
cufflinks 0.082     Low  
cufflinks 0.184        
cufflinks 0.302        
cufflinks 17.675     High High
cufflinks 0.007     Low Low
cufflinks 6.233        
cufflinks 9.158     High  
cufflinks 25.912     High High
cufflinks 0.009     Low Low
cufflinks 18.467     High High
cufflinks 13.486     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.249     High High
cufflinks 0.069        

0 Strain