Gene : Glyma.05G230400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11886//PTHR11886:SF47 - DYNEIN LIGHT CHAIN Genomic Order:  2304
Name:  ? Glyma.05G230400 Secondary Identifier:  ? PAC:30527269
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G230400 0.5kb upstream 0.5kb upstream 1704 true Chr05: 40828680-40830383 Glycine max
Glyma.05G230400 0.5kb upstream 0.5kb upstream 500 false Chr05: 40829884-40830383 Glycine max
Glyma.05G230400 0.5kb downstream 0.5kb downstream 1704 true Chr05: 40828180-40829883 Glycine max
Glyma.05G230400 0.5kb downstream 0.5kb downstream 500 false Chr05: 40828180-40828679 Glycine max
Glyma.05G230400 1.0kb upstream 1.0kb upstream 2204 true Chr05: 40828680-40830883 Glycine max
Glyma.05G230400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40829884-40830883 Glycine max
Glyma.05G230400 1.0kb downstream 1.0kb downstream 2204 true Chr05: 40827680-40829883 Glycine max
Glyma.05G230400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40827680-40828679 Glycine max
Glyma.05G230400 2.0kb upstream 2.0kb upstream 3204 true Chr05: 40828680-40831883 Glycine max
Glyma.05G230400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40829884-40831883 Glycine max
Glyma.05G230400 2.0kb downstream 2.0kb downstream 3204 true Chr05: 40826680-40829883 Glycine max
Glyma.05G230400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40826680-40828679 Glycine max
Glyma.05G230400 5.0kb upstream 5.0kb upstream 6204 true Chr05: 40828680-40834883 Glycine max
Glyma.05G230400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40829884-40834883 Glycine max
Glyma.05G230400 5.0kb downstream 5.0kb downstream 6204 true Chr05: 40823680-40829883 Glycine max
Glyma.05G230400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40823680-40828679 Glycine max
Glyma.05G230400 10.0kb upstream 10.0kb upstream 11204 true Chr05: 40828680-40839883 Glycine max
Glyma.05G230400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40829884-40839883 Glycine max
Glyma.05G230400 10.0kb downstream 10.0kb downstream 11204 true Chr05: 40818680-40829883 Glycine max
Glyma.05G230400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40818680-40828679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312053 5265 Fabidae View MSA
124072980 5270 Rosid View MSA
123740805 5271 Pentapetalae View MSA
122787832 5272 Eudicot View MSA
122043951 5273 Angiosperm View MSA
121349084 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.288672 0.0 1.13448   Low
cufflinks 2.67384 0.0 9.35969    
cufflinks 31.9435 0.0 85.4116 High  
cufflinks 4.75077 0.0 15.54    
cufflinks 19.2205 0.0 52.8993    
cufflinks 37.4846 0.0 100.071 High  
cufflinks 19.3893 0.0 53.346    
cufflinks 17.9757 0.0 49.6629    
cufflinks 12.6612 0.0 36.2893    
cufflinks 6.228        
cufflinks 58.673     High High
cufflinks 26.965     High  
cufflinks 17.063     High  
cufflinks 18.006     High  
cufflinks 30.132     High  
cufflinks 1.866        
cufflinks 12.259     High  
cufflinks 1.943        
cufflinks 1.564       Low
cufflinks 1.127       Low
cufflinks 52.337     High High
cufflinks 1.311       Low
cufflinks 1.177       Low
cufflinks 44.431     High High
cufflinks 1.194       Low
cufflinks 35.591     High  

0 Strain