Gene : Glyma.05G231700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  2317
Name:  ? Glyma.05G231700 Secondary Identifier:  ? PAC:30524215
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G231700 0.5kb upstream 0.5kb upstream 4939 true Chr05: 40915303-40920241 Glycine max
Glyma.05G231700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40915303-40915802 Glycine max
Glyma.05G231700 0.5kb downstream 0.5kb downstream 4939 true Chr05: 40915803-40920741 Glycine max
Glyma.05G231700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40920242-40920741 Glycine max
Glyma.05G231700 1.0kb upstream 1.0kb upstream 5439 true Chr05: 40914803-40920241 Glycine max
Glyma.05G231700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40914803-40915802 Glycine max
Glyma.05G231700 1.0kb downstream 1.0kb downstream 5439 true Chr05: 40915803-40921241 Glycine max
Glyma.05G231700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40920242-40921241 Glycine max
Glyma.05G231700 2.0kb upstream 2.0kb upstream 6439 true Chr05: 40913803-40920241 Glycine max
Glyma.05G231700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40913803-40915802 Glycine max
Glyma.05G231700 2.0kb downstream 2.0kb downstream 6439 true Chr05: 40915803-40922241 Glycine max
Glyma.05G231700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40920242-40922241 Glycine max
Glyma.05G231700 5.0kb upstream 5.0kb upstream 9439 true Chr05: 40910803-40920241 Glycine max
Glyma.05G231700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40910803-40915802 Glycine max
Glyma.05G231700 5.0kb downstream 5.0kb downstream 9439 true Chr05: 40915803-40925241 Glycine max
Glyma.05G231700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40920242-40925241 Glycine max
Glyma.05G231700 10.0kb upstream 10.0kb upstream 14439 true Chr05: 40905803-40920241 Glycine max
Glyma.05G231700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40905803-40915802 Glycine max
Glyma.05G231700 10.0kb downstream 10.0kb downstream 14439 true Chr05: 40915803-40930241 Glycine max
Glyma.05G231700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40920242-40930241 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301584 5265 Fabidae View MSA
124070962 5270 Rosid View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.70608 0.0 18.4126    
cufflinks 8.19805 0.0 22.26    
cufflinks 8.14415 0.0 22.1645    
cufflinks 8.14596 0.0 22.1122    
cufflinks 11.3616 0.0 30.3695   High
cufflinks 8.68624 0.0 23.4561    
cufflinks 13.822 0.0 36.8768   High
cufflinks 5.84084 0.0 16.2647   Low
cufflinks 7.68114 0.0 20.9043    
cufflinks 1.844       Low
cufflinks 1.95       Low
cufflinks 2.956        
cufflinks 3.625       High
cufflinks 4.635       High
cufflinks 2.805        
cufflinks 3.157        
cufflinks 2.586        
cufflinks 2.645        
cufflinks 3.573        
cufflinks 3.471        
cufflinks 1.657       Low
cufflinks 2.938        
cufflinks 2.793        
cufflinks 1.737       Low
cufflinks 2.976        
cufflinks 2.589        

0 Strain